BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0520.1
(200 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_002281596.1 PREDICTED: E3 ubiquitin-protein ligase At3g02290 ... 225 1e-71
XP_003531881.1 PREDICTED: E3 ubiquitin-protein ligase At3g02290-... 223 7e-71
XP_015880691.1 PREDICTED: E3 ubiquitin-protein ligase At3g02290 ... 223 1e-70
>XP_002281596.1 PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Vitis vinifera]
CBI16931.3 unnamed protein product, partial [Vitis
vinifera]
Length = 225
Score = 225 bits (573), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 143/187 (76%), Gaps = 4/187 (2%)
Query: 16 YARLFQRGRINALPSSIESTTTSNSPSSHDNSLSDFYRSPPRPLPYDADPRSYHSRRDRF 75
Y LF+RG +N++PSSI+ + +S +S D+SLSD YRSPPRPLPYD DPR++ +RD
Sbjct: 41 YTSLFRRGEVNSIPSSIQGAASLSSTTSLDDSLSDMYRSPPRPLPYDVDPRNFRLQRDGL 100
Query: 76 FSRRKKGSSHS-EESEPLRRRLPDTDLGYVHKGEKWIDSDEDRPNEGLPKSTVKHQLAVS 134
SRR+KGSSHS EESEPLR D D + +KW +SD D E P+S+VKH +A +
Sbjct: 101 VSRREKGSSHSHEESEPLRSD-TDGDSESLITRDKWNESD-DGSKEQRPRSSVKHSMAKT 158
Query: 135 SRA-DYSYSSSEDEDVCPTCLEEYTPDNPRIVTECSHHYHLGCIYEWMERSENCPVCGKV 193
+ + YSSSEDEDVCPTCLEEYTP+NP+I+T+CSHH+HLGCIYEWMERSE CPVCGKV
Sbjct: 159 TMGLGFIYSSSEDEDVCPTCLEEYTPENPKIMTKCSHHFHLGCIYEWMERSETCPVCGKV 218
Query: 194 MAFNETS 200
M F+ET+
Sbjct: 219 MMFDETT 225
>XP_003531881.1 PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Glycine max]
XP_006585808.1 PREDICTED: E3 ubiquitin-protein ligase
At3g02290-like [Glycine max] KHN30308.1 E3
ubiquitin-protein ligase [Glycine soja] KRH45106.1
hypothetical protein GLYMA_08G251300 [Glycine max]
KRH45107.1 hypothetical protein GLYMA_08G251300 [Glycine
max] KRH45108.1 hypothetical protein GLYMA_08G251300
[Glycine max]
Length = 227
Score = 223 bits (568), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 143/187 (76%), Gaps = 3/187 (1%)
Query: 16 YARLFQRGRINALPSSIESTTTSNSPSSHDNSLSDFYRSPPRPLPYDADPRSYHSRRDRF 75
Y +F+RG ++A+PSSI+ + S +S DNSLSD YRSPPRPLPYDADPR + S+R+
Sbjct: 41 YESIFRRGEVHAIPSSIQGAASMTSTASLDNSLSDMYRSPPRPLPYDADPRFFRSQREGL 100
Query: 76 FSRRKKGSSH-SEESEPLRRRLPDTDLGYVHKGEKWIDSDEDRPNEGLPKSTVKHQLA-V 133
SRR+KGSSH +EESEPLR + D D ++ G KW D+ ED E KS+V+ A +
Sbjct: 101 VSRREKGSSHLNEESEPLRGDV-DADSESLNSGGKWNDTSEDGSKEYRSKSSVRLSSAKL 159
Query: 134 SSRADYSYSSSEDEDVCPTCLEEYTPDNPRIVTECSHHYHLGCIYEWMERSENCPVCGKV 193
++ A YSSSE+EDVCPTCLEEYT +NP+IVT+CSHH+HLGCIYEWMERS++CPVCGKV
Sbjct: 160 TTGAGVVYSSSEEEDVCPTCLEEYTEENPKIVTKCSHHFHLGCIYEWMERSDSCPVCGKV 219
Query: 194 MAFNETS 200
M F+ET+
Sbjct: 220 MVFDETT 226
>XP_015880691.1 PREDICTED: E3 ubiquitin-protein ligase At3g02290 isoform X2
[Ziziphus jujuba]
Length = 227
Score = 223 bits (567), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 144/188 (76%), Gaps = 4/188 (2%)
Query: 16 YARLFQRGRINALPSSIESTTTSNSPSSHDNSLSDFYRSPPRPLPYDADPRSYHSRRDRF 75
YA +FQRG +++LPSS++ + +S +S+DNSL+D YRSPPRPLPYDADPR + +RD
Sbjct: 41 YASIFQRGEVHSLPSSVQGAASMSSTASYDNSLADMYRSPPRPLPYDADPRYFRLQRDGL 100
Query: 76 FSRRKKGSSHS-EESEPLRRRLPDTDLGYVHKGEKWIDSD-EDRPNEGLPKSTVKHQLAV 133
SRR+KGSSHS EESEPLR + D + + G+KW +S ED E KS++K A
Sbjct: 101 ISRREKGSSHSHEESEPLRGDV-DAENESLSTGDKWNESACEDGSKEQRSKSSIKFSSAK 159
Query: 134 SSRADYS-YSSSEDEDVCPTCLEEYTPDNPRIVTECSHHYHLGCIYEWMERSENCPVCGK 192
++ + Y+SSEDEDVCPTCLEEYT +NP+IVT+CSHH+HLGCIYEWMERSE+CPVCGK
Sbjct: 160 TTTGVINFYTSSEDEDVCPTCLEEYTQENPKIVTKCSHHFHLGCIYEWMERSESCPVCGK 219
Query: 193 VMAFNETS 200
VM F+ET+
Sbjct: 220 VMVFDETT 227