BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0580.1
(208 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013589557.1 PREDICTED: uncharacterized protein LOC106297989 [... 98 3e-20
XP_013704405.1 PREDICTED: uncharacterized protein LOC106408128 [... 94 6e-19
XP_013745866.1 PREDICTED: uncharacterized protein LOC106448544 [... 92 2e-18
>XP_013589557.1 PREDICTED: uncharacterized protein LOC106297989 [Brassica oleracea
var. oleracea]
Length = 1044
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 95/209 (45%), Gaps = 56/209 (26%)
Query: 1 MDNCHLIFGRPWIFDVDATYHCRANTFEFSWFQRTLKLLPLTEKLDSSVGTTTSEPPHQA 60
MD CHL+ GRPW FD DA + +ANT+ F + RT+ L+P E
Sbjct: 456 MDACHLLLGRPWQFDRDAIHRGKANTYSFVFDNRTVTLVPSKE----------------- 498
Query: 61 NTSTDAQPTSPHRASTTTPSQHHHPDRSSLTDPHRQQQSLSNTTTNSKNPFTETHQHQKQ 120
QP R+ T + +S LT P K F
Sbjct: 499 ------QPEPSARSEGTNTKGNTSSAKSLLTLP--------------KGEF--------- 529
Query: 121 QPPKPTITETDPPTTPLRGFLLATKDTPTTDRPPHPSVQPLLDEFQDLIPSITLPS-LPP 179
+ I + D L+A+ T T + P P+ PLL +F D+ P+ LPS LPP
Sbjct: 530 ---EKFILDADVLWA-----LIASPATTTIETEPSPAFIPLLQDFGDVFPN-ELPSDLPP 580
Query: 180 LRDIQHQIDLIPGDNLPNLPHHKMSPQEH 208
LRDIQH IDL+P LPN PH++MSPQEH
Sbjct: 581 LRDIQHHIDLVPNAVLPNRPHYRMSPQEH 609
>XP_013704405.1 PREDICTED: uncharacterized protein LOC106408128 [Brassica napus]
Length = 926
Score = 94.4 bits (233), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 91/210 (43%), Gaps = 53/210 (25%)
Query: 1 MDNCHLIFGRPWIFDVDATYHCRANTFEFSWFQRTLKLLPLTEKLDSSVGTTTSEPPHQA 60
MD H++ GRPW +D D ++ R+N + F + R + LLP PP Q
Sbjct: 405 MDVSHILLGRPWQYDRDVSHSGRSNVYTFFFENRRIVLLP-----------NKVLPPEQP 453
Query: 61 NTSTDAQPTSPHRASTTTPSQHHHPDRSSLTDPHRQQQSLSNTTT--NSKNPFTETHQHQ 118
TS QP + TDP + + S+ T S F +
Sbjct: 454 QTS---QPRT--------------------TDPRVAEGTGSSNTVLFCSAAAFAQ----- 485
Query: 119 KQQPPKPTITETDPPTTPLRGFLLATKDTPTTDRPPHPSVQPLLDEFQDLIPSITLPSLP 178
+ T LLA T PS+ LLDEF+D+ P LP
Sbjct: 486 ------------ELRTADFAVALLAVDPVAATQSSVDPSITRLLDEFEDIFPQELPLGLP 533
Query: 179 PLRDIQHQIDLIPGDNLPNLPHHKMSPQEH 208
PLRDIQHQIDL+PG LPN PH++MSPQEH
Sbjct: 534 PLRDIQHQIDLVPGAALPNRPHYRMSPQEH 563
>XP_013745866.1 PREDICTED: uncharacterized protein LOC106448544 [Brassica napus]
Length = 1018
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 90/210 (42%), Gaps = 53/210 (25%)
Query: 1 MDNCHLIFGRPWIFDVDATYHCRANTFEFSWFQRTLKLLPLTEKLDSSVGTTTSEPPHQA 60
MD H++ GRPW +D D ++ R+N + F + R + LL T PP Q
Sbjct: 486 MDVSHILLGRPWQYDRDVSHSGRSNVYTFFFENRRIVLL-----------TNEVLPPEQP 534
Query: 61 NTSTDAQPTSPHRASTTTPSQHHHPDRSSLTDPHRQQQSLSNTTT--NSKNPFTETHQHQ 118
TS QP + DP + + S+ T S F +
Sbjct: 535 QTS---QPRT--------------------IDPRVAEGTGSSNTVLFCSAAAFAQ----- 566
Query: 119 KQQPPKPTITETDPPTTPLRGFLLATKDTPTTDRPPHPSVQPLLDEFQDLIPSITLPSLP 178
+ T LLA T PS+ LLDEF+D+ P LP
Sbjct: 567 ------------ELRTADFAVALLAVDPVAATQSSVDPSITRLLDEFEDIFPQELPLGLP 614
Query: 179 PLRDIQHQIDLIPGDNLPNLPHHKMSPQEH 208
PLRDIQHQIDL+PG LPN PH++MSPQEH
Sbjct: 615 PLRDIQHQIDLVPGAGLPNRPHYRMSPQEH 644