BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0690.1
(204 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010257982.1 PREDICTED: charged multivesicular body protein 1-... 345 e-119
XP_010255025.1 PREDICTED: charged multivesicular body protein 1-... 321 e-110
XP_001764378.1 predicted protein [Physcomitrella patens] EDQ7093... 305 e-103
>XP_010257982.1 PREDICTED: charged multivesicular body protein 1-like [Nelumbo
nucifera]
Length = 203
Score = 345 bits (885), Expect = e-119, Method: Compositional matrix adjust.
Identities = 173/204 (84%), Positives = 189/204 (92%), Gaps = 1/204 (0%)
Query: 1 MGKDKLFDQIFQLKITSKSLVRQAKKCEQEEKSEKIKVKKAIEKGNMDGARIYAQNAIRK 60
MGK+KL +QIFQLK+TSKSLVRQAKKCEQEEK+EK KVKKAIEKGNMDGARIYAQNAIRK
Sbjct: 1 MGKEKLMEQIFQLKLTSKSLVRQAKKCEQEEKTEKAKVKKAIEKGNMDGARIYAQNAIRK 60
Query: 61 RNEQLNYLRFASRLDAVVARLGSQSNFQSIGKSMSGIVKSLEGALSVGNMEKISKTMDGF 120
RNEQLNYLR ASRLDAVVARLGSQSN Q++GKSMSGIVKSLEGALSVGNMEK+S+TMD F
Sbjct: 61 RNEQLNYLRLASRLDAVVARLGSQSNLQTVGKSMSGIVKSLEGALSVGNMEKMSQTMDRF 120
Query: 121 EKVFVNMEVQASFTEKSMEGTTSLSTPEGEVGSLMQQVADDYGLEVSMKLPSAGKETVGV 180
EK FVNMEVQASF EKSM GTT+LSTPE EVGSLMQQVADDYGLEVS+KLP AG + V +
Sbjct: 121 EKGFVNMEVQASFMEKSMAGTTTLSTPEEEVGSLMQQVADDYGLEVSLKLPQAGNKAVVL 180
Query: 181 KEKGGVIASEEELSRRLAELKSKG 204
KEKG V+ SEEEL+RRLA+LK+KG
Sbjct: 181 KEKGAVV-SEEELNRRLADLKAKG 203
>XP_010255025.1 PREDICTED: charged multivesicular body protein 1-like [Nelumbo
nucifera]
Length = 203
Score = 321 bits (822), Expect = e-110, Method: Compositional matrix adjust.
Identities = 163/204 (79%), Positives = 182/204 (89%), Gaps = 1/204 (0%)
Query: 1 MGKDKLFDQIFQLKITSKSLVRQAKKCEQEEKSEKIKVKKAIEKGNMDGARIYAQNAIRK 60
MGK+KL +QI QLK+TSKSLVR+AKKCEQEEKSEK KVKK IEKGNMDG RIYAQNAIRK
Sbjct: 1 MGKEKLMEQIIQLKLTSKSLVREAKKCEQEEKSEKAKVKKVIEKGNMDGTRIYAQNAIRK 60
Query: 61 RNEQLNYLRFASRLDAVVARLGSQSNFQSIGKSMSGIVKSLEGALSVGNMEKISKTMDGF 120
NEQLNYLR ASRLDAVVARL SQ N Q++GKSMSGIVKSLEGALSVGNMEKIS+TMD F
Sbjct: 61 CNEQLNYLRLASRLDAVVARLESQRNLQTVGKSMSGIVKSLEGALSVGNMEKISQTMDRF 120
Query: 121 EKVFVNMEVQASFTEKSMEGTTSLSTPEGEVGSLMQQVADDYGLEVSMKLPSAGKETVGV 180
+K FVNMEVQASF EKSM GTT+LSTP+ EV SLMQQVA+DYGLEVS+KLP AG + V +
Sbjct: 121 KKGFVNMEVQASFMEKSMAGTTTLSTPKEEVRSLMQQVANDYGLEVSLKLPQAGNKAVEL 180
Query: 181 KEKGGVIASEEELSRRLAELKSKG 204
KEK GV+ S+EEL+RRLA+LK+KG
Sbjct: 181 KEK-GVVVSKEELNRRLADLKAKG 203
>XP_001764378.1 predicted protein [Physcomitrella patens] EDQ70932.1 predicted
protein [Physcomitrella patens]
Length = 207
Score = 305 bits (781), Expect = e-103, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 173/203 (85%), Gaps = 1/203 (0%)
Query: 2 GKDKLFDQIFQLKITSKSLVRQAKKCEQEEKSEKIKVKKAIEKGNMDGARIYAQNAIRKR 61
G+DKL DQIFQLK TSKSLVR AKKCE++EKSEK+KVKKAIEKGNMDGARIYAQNAIRK
Sbjct: 6 GQDKLMDQIFQLKFTSKSLVRAAKKCEKDEKSEKLKVKKAIEKGNMDGARIYAQNAIRKH 65
Query: 62 NEQLNYLRFASRLDAVVARLGSQSNFQSIGKSMSGIVKSLEGALSVGNMEKISKTMDGFE 121
NEQLNYLR +SRLDAVVA+LG+QS Q++ KSM+GIVKSL+ AL+VGNMEKIS+TMD FE
Sbjct: 66 NEQLNYLRLSSRLDAVVAQLGTQSKLQTVAKSMAGIVKSLDSALAVGNMEKISQTMDQFE 125
Query: 122 KVFVNMEVQASFTEKSMEGTTSLSTPEGEVGSLMQQVADDYGLEVSMKLPSAGKETVGVK 181
K F+NMEVQ+ F E +M G+TSLSTPE +V SL+ QVADDYGLEVS+ LP AG + VK
Sbjct: 126 KTFMNMEVQSEFIETAMAGSTSLSTPEDDVNSLLHQVADDYGLEVSVNLPQAGATAIPVK 185
Query: 182 EKGGVIASEEELSRRLAELKSKG 204
E V E++LSRRLAELKS+G
Sbjct: 186 ETPTVNV-EDDLSRRLAELKSRG 207