BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0920.1
(367 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010258025.1 PREDICTED: transcription initiation factor TFIID ... 464 e-161
XP_010260189.1 PREDICTED: transcription initiation factor TFIID ... 461 e-160
XP_002282259.1 PREDICTED: transcription initiation factor TFIID ... 422 e-144
>XP_010258025.1 PREDICTED: transcription initiation factor TFIID subunit 8-like
[Nelumbo nucifera]
Length = 367
Score = 464 bits (1193), Expect = e-161, Method: Compositional matrix adjust.
Identities = 231/371 (62%), Positives = 278/371 (74%), Gaps = 10/371 (2%)
Query: 1 MSDGGGENGRDDEKRKLQAGGSDDFGRAIARIAVAQICETAGFQSIHESTLDAFSDILIR 60
MSDGGGE GR+DE+ + GSDDFGRAI++IAVAQ+CE+ GFQS +S L+A SDI IR
Sbjct: 1 MSDGGGECGREDEQDARRESGSDDFGRAISKIAVAQMCESVGFQSSRQSALEALSDIAIR 60
Query: 61 YVCDLGKTAHFYANLADRIECNIFDIIQGLEDLGIGQGFTSASNPNHCLVDSGTIRELIH 120
Y+ DLGK A FYANLA R CN+FDIIQGLEDLG QGF AS+ + C V SGT+R++
Sbjct: 61 YIRDLGKAARFYANLAGRTHCNVFDIIQGLEDLGSPQGFAGASDVDSCFVVSGTVRDITR 120
Query: 121 YVNSSEESPFARFVPRFPINRNRKPTPSFLQIGETAPGKHIPDWLPAFPDPHTYIHTPVW 180
YV+ +EE PFAR VPRFPI RNRK PSF+QIGE PGKHI WLPAFPDPHTYIHTPVW
Sbjct: 121 YVSWAEEIPFARPVPRFPIIRNRKSIPSFVQIGENPPGKHISPWLPAFPDPHTYIHTPVW 180
Query: 181 NERTTDPRIDKIEQAKQRRKAESSLLSLQQRLICSSSETPLSLDYRDEAGKADHVELT-- 238
N+R TDPR DKIEQA+QRRKAE SLLSLQQRL C+ S T +D AD V+L
Sbjct: 181 NDRETDPRTDKIEQARQRRKAERSLLSLQQRLACNGSATTAQVD------PADDVKLKRV 234
Query: 239 --NNPFLAPPIEASAEEVLVPVFPAKIRKDKVLGNQLSVLDTFAPAIEAAKSGFSDLGDG 296
N FLAPP++ ++V V P ++ D V+ NQ+SVL+TFAPAIEAAKSG + GD
Sbjct: 235 ADGNQFLAPPMQLGEKDVSPVVLPVQLANDLVVENQISVLETFAPAIEAAKSGVCEPGDA 294
Query: 297 EKRALPNKRAVVNFKFGVGKKSLGMPVDLDLQNIGVWKTGAWFERDNERDEKKRRAEQIL 356
+ LPNKR V+FKFG+GKKSLG+P+DL L ++ V KT AWF +D E+D+KKRRAEQIL
Sbjct: 295 GRTTLPNKRPTVHFKFGIGKKSLGVPLDLSLHSMSVGKTTAWFGKDEEKDDKKRRAEQIL 354
Query: 357 RESMEIQQDLS 367
+E ME Q+L+
Sbjct: 355 KECMENSQELA 365
>XP_010260189.1 PREDICTED: transcription initiation factor TFIID subunit 8-like
[Nelumbo nucifera]
Length = 369
Score = 461 bits (1187), Expect = e-160, Method: Compositional matrix adjust.
Identities = 232/370 (62%), Positives = 279/370 (75%), Gaps = 5/370 (1%)
Query: 1 MSDGGGENGRDDE---KRKLQAGGSDDFGRAIARIAVAQICETAGFQSIHESTLDAFSDI 57
MSDGGGE+GRD+E +RK G DDFGRAIA+IAVAQICE GFQS +S L++ SD+
Sbjct: 1 MSDGGGESGRDNEQDARRKSGGRGGDDFGRAIAKIAVAQICENVGFQSFQQSALESLSDV 60
Query: 58 LIRYVCDLGKTAHFYANLADRIECNIFDIIQGLEDLGIGQGFTSASNPNHCLVDSGTIRE 117
IRY+ DLGKTAHFYANLA R CN+FD+IQGLEDLG QGF+ AS+ N CL SGT+RE
Sbjct: 61 AIRYLRDLGKTAHFYANLAGRTHCNVFDVIQGLEDLGSSQGFSGASDVNRCLASSGTVRE 120
Query: 118 LIHYVNSSEESPFARFVPRFPINRNRKPTPSFLQIGETAPGKHIPDWLPAFPDPHTYIHT 177
+ YV+ +E PFAR VPRFP+ RNRKPTPSFLQIGET PG HIP WLPAFPDPHTYI T
Sbjct: 121 ISQYVSLEQEIPFARPVPRFPVTRNRKPTPSFLQIGETPPGNHIPPWLPAFPDPHTYIQT 180
Query: 178 PVWNERTTDPRIDKIEQAKQRRKAESSLLSLQQRLICSSSETPLSLDYRDEAGKADHVEL 237
PVWNER TDPR DK+EQA+QRRKAE SLL+LQQRL C+ S P +D D AGK
Sbjct: 181 PVWNERATDPRTDKVEQARQRRKAERSLLNLQQRLACNGSVAPAQVDPAD-AGKLKRA-A 238
Query: 238 TNNPFLAPPIEASAEEVLVPVFPAKIRKDKVLGNQLSVLDTFAPAIEAAKSGFSDLGDGE 297
+NPFLA P++ ++V V PAK+ K+ + NQ+SVL+ FAPAIEA KSG + D
Sbjct: 239 ESNPFLASPLQQGEKDVSPVVCPAKLAKNMAVENQVSVLEAFAPAIEAVKSGVCESVDAG 298
Query: 298 KRALPNKRAVVNFKFGVGKKSLGMPVDLDLQNIGVWKTGAWFERDNERDEKKRRAEQILR 357
K+ LPNKR V+FKFG+GKK+LG PVDL L + KT +WF +D E+D+KKRRAE+IL+
Sbjct: 299 KKVLPNKRPTVHFKFGIGKKALGAPVDLSLHSKSAGKTASWFGKDEEKDDKKRRAEKILK 358
Query: 358 ESMEIQQDLS 367
ESME QQ+ +
Sbjct: 359 ESMENQQEFA 368
>XP_002282259.1 PREDICTED: transcription initiation factor TFIID subunit 8 [Vitis
vinifera]
Length = 368
Score = 422 bits (1086), Expect = e-144, Method: Compositional matrix adjust.
Identities = 205/371 (55%), Positives = 268/371 (72%), Gaps = 9/371 (2%)
Query: 1 MSDGGGENGRDDEKRKLQAGGSDDFGRAIARIAVAQICETAGFQSIHESTLDAFSDILIR 60
MSDGG ++ R+ + + G D+FGRA+++IAVAQICE+ GF+ +S L A S+I +R
Sbjct: 1 MSDGGEDDRRNSDNNAPKRAGPDEFGRAVSKIAVAQICESVGFEGFQDSALQALSNIAVR 60
Query: 61 YVCDLGKTAHFYANLADRIECNIFDIIQGLEDLGIGQGFTSASNPNHCLVDSGTIRELIH 120
Y+CD+GKTA+F ANLA R +CN+FD+I+GLEDLG +GF+ AS + C+V SGT+RE++
Sbjct: 61 YLCDVGKTANFCANLAGRTQCNVFDVIRGLEDLGSSEGFSGASGVDQCIVSSGTVREIVE 120
Query: 121 YVNSSEESPFARFVPRFPINRNRKPTPSFLQIGETAPGKHIPDWLPAFPDPHTYIHTPVW 180
YVNS++E PFA+ VPRFP+ RN K TPSF+Q+GET GKHIP WLPAFPD HTYI TP+W
Sbjct: 121 YVNSAKEIPFAQPVPRFPVVRNCKATPSFVQMGETPVGKHIPPWLPAFPDSHTYIQTPMW 180
Query: 181 NERTTDPRIDKIEQAKQRRKAESSLLSLQQRLICSSSETPLSLDYRDEAGKADHVELT-- 238
NER TDPR DK+EQA+QRRKAE SLLSLQQRL+C+ S + + G+ D E +
Sbjct: 181 NERATDPRADKLEQARQRRKAERSLLSLQQRLVCNGSASAST-----SVGRCDDAEASRA 235
Query: 239 --NNPFLAPPIEASAEEVLVPVFPAKIRKDKVLGNQLSVLDTFAPAIEAAKSGFSDLGDG 296
NP+LA P++ ++V V PAK+ D V+ N +SVL+TFAPAIEA K+ F D G+
Sbjct: 236 AEGNPYLASPLQFGEKDVSTVVLPAKLLDDLVVDNHVSVLETFAPAIEAVKNSFVDSGES 295
Query: 297 EKRALPNKRAVVNFKFGVGKKSLGMPVDLDLQNIGVWKTGAWFERDNERDEKKRRAEQIL 356
EK +P KR+ V+FK GKK LG VDL L+N V K + RD ERD+KKRRAE IL
Sbjct: 296 EKNVVPEKRSAVHFKLRTGKKILGESVDLRLKNKSVGKVVSLIGRDEERDDKKRRAEYIL 355
Query: 357 RESMEIQQDLS 367
R+SME Q+L+
Sbjct: 356 RQSMENPQELT 366