BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g1090.1
(152 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AER13172.1 putative gag/pol polyprotein [Phaseolus vulgaris] 146 7e-38
KYP52740.1 Retrovirus-related Pol polyprotein from transposon TN... 140 8e-38
XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein fro... 135 3e-34
>AER13172.1 putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 146 bits (368), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 101/145 (69%), Gaps = 6/145 (4%)
Query: 13 ANYHLWKGKMEDLLFVKEFHAPLFFEKKPDEKTDDQWTLLNRQGLLNKLSDMGINFDEEI 72
Y GKM+DLLFVK+ H P+F +KP +KTD++W ++QG ++LS MGI FD+E+
Sbjct: 102 VTYRPRTGKMKDLLFVKKLHLPVFATEKPKDKTDEEWKFEHQQGFRDQLSQMGIKFDDEV 161
Query: 73 HGLWLLGTLPDSWEVFRMSLCNSTSEGVISMDLVKNSVLNEETRRQSNPISSSSDVLLLS 132
GLWLL TLPDSWE FR+S+ NS+ +GV+S++ VK+SVLNEE RR+++ SS S+VL
Sbjct: 162 LGLWLLNTLPDSWETFRVSITNSSPDGVVSLENVKSSVLNEEMRRKAHGTSSHSEVLFTE 221
Query: 133 RGGRSSHRESK------RNRSRKTY 151
GRS +E K R++S+ Y
Sbjct: 222 NRGRSQKKELKGSKQNSRSKSKSRY 246
>KYP52740.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 340
Score = 140 bits (353), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 100/175 (57%), Gaps = 35/175 (20%)
Query: 7 MISLNGANYHLWKGKMEDLLFVKEFHAPLFFEKKPDEKTDDQW----------------T 50
MI+LN NYH WKGKM+DLLFVK+ H P+F +KPD +D+ W
Sbjct: 1 MIALNDTNYHFWKGKMKDLLFVKKMHLPIFTTQKPDFMSDEDWDFEHQQVCGFIRNNKLY 60
Query: 51 LLNR-------------------QGLLNKLSDMGINFDEEIHGLWLLGTLPDSWEVFRMS 91
LLN QGLL++LS+MGI F +E+ GLWLL TLP+SWE FR+S
Sbjct: 61 LLNCLMNLRYKESSSISDHLNEFQGLLDQLSEMGIKFHDEVLGLWLLNTLPESWETFRVS 120
Query: 92 LCNSTSEGVISMDLVKNSVLNEETRRQSNPISSSSDVLLLSRGGRSSHRESKRNR 146
+ NS GV+S+ K+S LNEE RR++ SS S+VL+ GRS E K R
Sbjct: 121 ITNSIPTGVVSLQAAKSSALNEEMRRKAQGSSSQSEVLVTENRGRSQKNEPKGGR 175
>XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Gossypium arboreum]
Length = 1184
Score = 135 bits (341), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 94/135 (69%), Gaps = 5/135 (3%)
Query: 22 MEDLLFVKEFHAPLFFEKKPDEKTDDQWTLLNRQGLLNKLSDMGINFDEEIHGLWLLGTL 81
M+DLLFVK H P+F +KPD K+D++W ++Q ++N+L MG+ FD+EI GL LL TL
Sbjct: 1 MKDLLFVKALHLPIFTTQKPDSKSDEEWEFEHQQSVMNQLLGMGVKFDDEILGLGLLATL 60
Query: 82 PDSWEVFRMSLCNSTSEGVISMDLVKNSVLNEETRRQSNPISSSSDVLLLSRGGRSSHRE 141
PDSWE FR+SL NS +G+I++DL + VLNEE RR+S +S S+VL++ GR+ ++
Sbjct: 61 PDSWETFRVSLINSAPQGIITLDLANSGVLNEEVRRRSQGSTSQSEVLVIENRGRNRDKD 120
Query: 142 SK-----RNRSRKTY 151
K R++SR Y
Sbjct: 121 GKGRDKSRSKSRSRY 135