BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g1260.1
(596 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010496967.1 PREDICTED: uncharacterized protein LOC104773992 i... 82 7e-13
XP_010496966.1 PREDICTED: uncharacterized protein LOC104773992 i... 82 8e-13
XP_010420185.1 PREDICTED: uncharacterized protein LOC104705805 [... 82 8e-13
>XP_010496967.1 PREDICTED: uncharacterized protein LOC104773992 isoform X2
[Camelina sativa]
Length = 467
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Query: 237 SVLTEDCVENLRMRYQIPATLKMRAPEPGETVVESRRPGYYALYENFLEAGIRFPISCLV 296
SV ED V L+ Y +P+++ +R P P E +++ G +YE + AG+R I L+
Sbjct: 19 SVFKEDDVLKLKTTYNLPSSVNLRLPLPSERAADAKH-GEVVVYELYFAAGLREVIPSLI 77
Query: 297 RDVLVRFGITPTQLMPNAWRLLMALEKLGENLNEPLTAQDVTAHYFMKANDHGSRQYQLK 356
V RF I+P QL P+AWRLL A++ GE + + ++V YF+ D +Y L
Sbjct: 78 AKVAKRFAISPGQLYPSAWRLLTAIQTFGELESITIGVEEVLCAYFLLKIDTDPGRYSLH 137
Query: 357 VR 358
R
Sbjct: 138 TR 139
>XP_010496966.1 PREDICTED: uncharacterized protein LOC104773992 isoform X1
[Camelina sativa]
Length = 498
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Query: 237 SVLTEDCVENLRMRYQIPATLKMRAPEPGETVVESRRPGYYALYENFLEAGIRFPISCLV 296
SV ED V L+ Y +P+++ +R P P E +++ G +YE + AG+R I L+
Sbjct: 50 SVFKEDDVLKLKTTYNLPSSVNLRLPLPSERAADAKH-GEVVVYELYFAAGLREVIPSLI 108
Query: 297 RDVLVRFGITPTQLMPNAWRLLMALEKLGENLNEPLTAQDVTAHYFMKANDHGSRQYQLK 356
V RF I+P QL P+AWRLL A++ GE + + ++V YF+ D +Y L
Sbjct: 109 AKVAKRFAISPGQLYPSAWRLLTAIQTFGELESITIGVEEVLCAYFLLKIDTDPGRYSLH 168
Query: 357 VR 358
R
Sbjct: 169 TR 170
>XP_010420185.1 PREDICTED: uncharacterized protein LOC104705805 [Camelina sativa]
Length = 552
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Query: 237 SVLTEDCVENLRMRYQIPATLKMRAPEPGETVVESRRPGYYALYENFLEAGIRFPISCLV 296
SV ED V L+ Y +P+++ +R P P E +++ G +YE + AG+R I L+
Sbjct: 50 SVFKEDDVLKLKTTYNLPSSVNLRLPLPSERAADAKH-GEVVVYELYFAAGLREVIPSLI 108
Query: 297 RDVLVRFGITPTQLMPNAWRLLMALEKLGENLNEPLTAQDVTAHYFMKANDHGSRQYQLK 356
V RF I+P QL P+AWRLL A++ GE + + ++V YF+ D +Y L
Sbjct: 109 AKVAKRFAISPGQLYPSAWRLLTAIQTFGELESITIGVEEVLCAYFLLKIDTDPGRYSLH 168
Query: 357 VR 358
R
Sbjct: 169 TR 170