BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g1410.1
(113 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010666431.1 PREDICTED: uncharacterized protein LOC104883587 [... 59 5e-08
XP_010678346.1 PREDICTED: uncharacterized protein LOC104893906 [... 59 7e-08
AAY99342.1 gag [Silene latifolia] 58 9e-08
>XP_010666431.1 PREDICTED: uncharacterized protein LOC104883587 [Beta vulgaris
subsp. vulgaris]
Length = 734
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 9/78 (11%)
Query: 45 KKYARRLFETAWCAFHRGYGHKTDNCRHLKNLIEEMVRKGELDKYIRKEQRPSNIR---- 100
K Y + ++ WC FH YGHKTD+C+ LK+ IE++VR+G +Y+ + R + R
Sbjct: 421 KMYYKGRDKSKWCEFHDDYGHKTDDCKDLKDGIEDLVRRGYFTQYLSRNDRKTPPREDDN 480
Query: 101 -----IRGQQTELELVSG 113
++ + TE+ ++SG
Sbjct: 481 GNRRPVKDRITEIHIISG 498
>XP_010678346.1 PREDICTED: uncharacterized protein LOC104893906 [Beta vulgaris
subsp. vulgaris]
Length = 1025
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 9/67 (13%)
Query: 56 WCAFHRGYGHKTDNCRHLKNLIEEMVRKGELDKYIRKEQRPSNIR---------IRGQQT 106
WC FH YGHKTD+C+ LK+ IE++VR+G +Y+ + R + R ++ + T
Sbjct: 135 WCEFHDDYGHKTDDCKDLKDGIEDLVRRGYFTQYLSRNDRKTPPREDDNGNRRPVKDRIT 194
Query: 107 ELELVSG 113
E+ ++SG
Sbjct: 195 EIHIISG 201
>AAY99342.1 gag [Silene latifolia]
Length = 319
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 56 WCAFHRGYGHKTDNCRHLKNLIEEMVRKGELDKY 89
+C +H GH TDNCRHLKN+IEE++RKG L KY
Sbjct: 280 YCEYHGHTGHLTDNCRHLKNVIEELIRKGSLSKY 313