BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g1430.1
(321 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_012480931.1 PREDICTED: uncharacterized protein LOC105795823 [... 349 e-112
ABB47020.1 retrotransposon protein, putative, Ty3-gypsy subclass... 326 e-100
KYP69532.1 Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan] 320 e-100
>XP_012480931.1 PREDICTED: uncharacterized protein LOC105795823 [Gossypium
raimondii]
Length = 693
Score = 349 bits (896), Expect = e-112, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 230/363 (63%), Gaps = 46/363 (12%)
Query: 1 MAPVELHELKDQIQQLLDMGFIRQSSSLWGRPVLLVKKTDGSMRLCIDYKGLNKVTVRNK 60
MA EL ELK Q+Q+L D GF+R S S WG PVL VKK DGSMRLCIDY+ LNKVT++NK
Sbjct: 74 MALTELKELKAQLQELTDKGFVRPSFSPWGAPVLFVKKKDGSMRLCIDYRQLNKVTIKNK 133
Query: 61 YPLPMIDDLFDQLRGSKWFSKIDLRSGYHQLRVRVEDIPKTAFVTRYGSYEFLVMPFGLT 120
YPLP IDDLFDQL+ + F KID+RSGY+QLRV+ D+PK AF TRYG YEFLVMPFGLT
Sbjct: 134 YPLPRIDDLFDQLKWATVFFKIDMRSGYYQLRVKESDVPKIAFRTRYGHYEFLVMPFGLT 193
Query: 121 NAPVVFMYLMNRVFWDFLDRFGIVFIDDILIYSKTEEDHEDHLRQAFQELKTRLTTTPIL 180
NAP +FM LMNR+F +LD+F +VFIDDILIYS+ E +H +HLR Q L+ +
Sbjct: 194 NAPAIFMDLMNRIFLPYLDKFVVVFIDDILIYSRDESEHAEHLRTVLQILREKKLYAK-F 252
Query: 181 TIPESCARVVIYADASIQGLGCVFMQSDSVVAYALRQLRPHERNYHTHDLELVAIVFAIK 240
+ E R V + + G ++ D ++AYA RQL+PHE+NY HDLEL AIVFA+K
Sbjct: 253 SKSEFWLREVGFLGHIVSSEG---IRVDRIIAYASRQLKPHEKNYPMHDLELAAIVFALK 309
Query: 241 IWRHYLYDP-------------------------------------VLRQD-----ILDE 258
IWRHY+ + V R D IL E
Sbjct: 310 IWRHYIREAQKNDNKLQARRAQCEADVDSDFQIGSDDCLMFRDRICVPRNDELIRTILCE 369
Query: 259 AHRSKYTVPPGRNKMYRDLKRRYWWSRMKKDVAEHVRKCEVCQMVKAENRHPLSLLEPLP 318
AH +V PG KMY DLK+ YWW MK D++E V KC +CQ VKAE++ P LL+P+
Sbjct: 370 AHSGDLSVHPGSVKMYNDLKKLYWWPGMKNDISEFVSKCLICQQVKAEHQVPSGLLQPVT 429
Query: 319 IPE 321
IPE
Sbjct: 430 IPE 432
>ABB47020.1 retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 989
Score = 326 bits (836), Expect = e-100, Method: Compositional matrix adjust.
Identities = 160/283 (56%), Positives = 195/283 (68%), Gaps = 36/283 (12%)
Query: 1 MAPVELHELKDQIQQLLDMGFIRQSSSLWGRPVLLVKKTDGSMRLCIDYKGLNKVTVRNK 60
MA EL E+K Q+ LL G+IR SSS WG PV+ V+K D + R+C+DY+ LN VT++NK
Sbjct: 338 MAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNK 397
Query: 61 YPLPMIDDLFDQLRGSKWFSKIDLRSGYHQLRVRVEDIPKTAFVTRYGSYEFLVMPFGLT 120
YPLP IDDLFDQL+G+ FSKIDLRSGYHQLR++ EDIPKTAF TRYG +E VM FGLT
Sbjct: 398 YPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLT 457
Query: 121 NAPVVFMYLMNRVFWDFLDRFGIVFIDDILIYSKTEEDHEDHLR---------------- 164
NAP FM L+N+VF ++LD+F +VFIDDILIYS+T+E+HE+HLR
Sbjct: 458 NAPAFFMNLINKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQLYAKFS 517
Query: 165 --------------------QAFQELKTRLTTTPILTIPESCARVVIYADASIQGLGCVF 204
Q+FQELK RL + PIL +P+ +Y DAS GLGCV
Sbjct: 518 KCEFWLSEKDVKYKWSEECEQSFQELKNRLVSAPILILPDPKKGFQVYCDASKLGLGCVL 577
Query: 205 MQSDSVVAYALRQLRPHERNYHTHDLELVAIVFAIKIWRHYLY 247
MQ VVAYA RQLRPHE+NY THDLEL A+V A+KIWRHYL+
Sbjct: 578 MQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLF 620
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 54/71 (76%)
Query: 251 LRQDILDEAHRSKYTVPPGRNKMYRDLKRRYWWSRMKKDVAEHVRKCEVCQMVKAENRHP 310
L+ IL EAH + Y++ PG KMY+DLK R+WW+ MK+++AE++ C+VCQ VKAE++ P
Sbjct: 769 LKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYIAVCDVCQRVKAEHQKP 828
Query: 311 LSLLEPLPIPE 321
LL+PL IPE
Sbjct: 829 AGLLQPLKIPE 839
>KYP69532.1 Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
Length = 715
Score = 320 bits (819), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/366 (47%), Positives = 217/366 (59%), Gaps = 68/366 (18%)
Query: 1 MAPVELHELKDQIQQLLDMGFIRQSSSLWGRPVLLVKKTDGSMRLCIDYKGLNKVTVRNK 60
M+P+EL ++K QI+ LL+ GF+R S S WG PVLLV K DGSMRLC+DY+ LNKVT++NK
Sbjct: 193 MSPIELVDIKKQIEDLLEKGFVRPSVSPWGAPVLLVTKKDGSMRLCVDYRKLNKVTIKNK 252
Query: 61 YPLPMIDDLFDQLRGSKWFSKIDLRSGYHQLRVRVEDIPKTAFVTRYGSYEFLVMPFGLT 120
YPLP IDDL DQL G+ FSKIDLRSGYHQ+RV+ ED+PKTAF TRYG YE + F
Sbjct: 253 YPLPRIDDLMDQLVGACVFSKIDLRSGYHQIRVKSEDVPKTAFRTRYGHYERFIKGFSKL 312
Query: 121 NAPVVFMYLMNRVFWDFLDRFGIVFIDDILIYSKTEEDHEDHLRQAFQELKTRLTTTPIL 180
P+ L R G++F+ D SK E+ +F+ LK +LT+ P+L
Sbjct: 313 ALPLT-----------SLTRKGVMFVWD----SKCED--------SFRALKEKLTSAPVL 349
Query: 181 TIPESCARVVIYADASIQGLGCVFMQSDSVVAYALRQLRPHERNYHTHDLELVAIVFAIK 240
+P+ V+Y DAS GLG V MQ VV+YA RQL+ HERNY THDLEL A+VF +K
Sbjct: 350 VLPDLSKTFVVYCDASKMGLGGVLMQEGMVVSYASRQLKVHERNYPTHDLELAAVVFTLK 409
Query: 241 IWRHYLYDPV--------------------LRQ-------------------------DI 255
IWRHYLY +RQ D
Sbjct: 410 IWRHYLYGSKFEVFSDHKSLRYLFDQKELNMRQWRWLEFLKDYDFDLSYHPGKANVVVDA 469
Query: 256 LDEAHRSKYTVPPGRNKMYRDLKRRYWWSRMKKDVAEHVRKCEVCQMVKAENRHPLSLLE 315
L E HRSK + PG KMY DL++ +WW RMKKD+AE V C VCQ K E++ P LL+
Sbjct: 470 LKEGHRSKLSFHPGATKMYHDLRKMFWWPRMKKDIAEFVSACLVCQKAKIEHQKPSGLLQ 529
Query: 316 PLPIPE 321
PL IPE
Sbjct: 530 PLSIPE 535