BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0100.1
(145 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_016433374.1 PREDICTED: RNA-directed DNA polymerase homolog [N... 203 7e-65
KYP62602.1 Retrovirus-related Pol polyprotein from transposon 17... 204 1e-64
KYP62637.1 Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan] 201 3e-64
>XP_016433374.1 PREDICTED: RNA-directed DNA polymerase homolog [Nicotiana tabacum]
Length = 164
Score = 203 bits (517), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 95/145 (65%), Positives = 114/145 (78%)
Query: 1 MCVDSRAINKITIKYGFPIPRLEDMLDHLTRATIFSKIDLKAGYHQIRIREGDEWKTTFK 60
MCVDS AINKITIKY FPIPRL+D+ D L A IFSKIDLK+GYHQIR++EGDEWKT FK
Sbjct: 1 MCVDSHAINKITIKYRFPIPRLDDLFDQLHGAKIFSKIDLKSGYHQIRMKEGDEWKTAFK 60
Query: 61 TKEGLYEWLVMLFGLSNAPSTFMRFMNQILKPCFNKFVVVYFDGILIFSKSKRDHFDHIK 120
T +GLYEWLVM FGLSNAPSTFMR M QI + KFVVVYFD ILI+SK + H +++
Sbjct: 61 TGKGLYEWLVMPFGLSNAPSTFMRLMTQIFQSYMGKFVVVYFDDILIYSKDDQQHLKYLR 120
Query: 121 AVFDVLRQNSYYMNVPKSFFFLEEV 145
+F+VLR+ + Y N+ K FF E++
Sbjct: 121 TIFEVLREQTLYANLKKCKFFSEQI 145
>KYP62602.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus
cajan]
Length = 200
Score = 204 bits (519), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 98/145 (67%), Positives = 112/145 (77%)
Query: 1 MCVDSRAINKITIKYGFPIPRLEDMLDHLTRATIFSKIDLKAGYHQIRIREGDEWKTTFK 60
MC D RAIN ITIKY PIPRL+DMLD L ++IFSKIDLK+GYHQIRI+EGDEWKT FK
Sbjct: 1 MCCDCRAINNITIKYRHPIPRLDDMLDELYGSSIFSKIDLKSGYHQIRIKEGDEWKTAFK 60
Query: 61 TKEGLYEWLVMLFGLSNAPSTFMRFMNQILKPCFNKFVVVYFDGILIFSKSKRDHFDHIK 120
TK GLYEWLVM FGL+NAPSTFMR MN L+ C +FVVVYFD ILI+SKS DH DH++
Sbjct: 61 TKFGLYEWLVMPFGLTNAPSTFMRLMNHTLRDCIGRFVVVYFDDILIYSKSLSDHVDHLR 120
Query: 121 AVFDVLRQNSYYMNVPKSFFFLEEV 145
V VLR N + NV K F ++ V
Sbjct: 121 QVLLVLRDNHLFANVDKCTFCVDNV 145
>KYP62637.1 Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
Length = 137
Score = 201 bits (510), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 95/137 (69%), Positives = 108/137 (78%)
Query: 1 MCVDSRAINKITIKYGFPIPRLEDMLDHLTRATIFSKIDLKAGYHQIRIREGDEWKTTFK 60
MC D RAIN ITIKY PIPRL+DMLD L ++IFSKIDLK+GYHQIRI+EGDEWKT FK
Sbjct: 1 MCCDCRAINNITIKYRHPIPRLDDMLDELHGSSIFSKIDLKSGYHQIRIKEGDEWKTAFK 60
Query: 61 TKEGLYEWLVMLFGLSNAPSTFMRFMNQILKPCFNKFVVVYFDGILIFSKSKRDHFDHIK 120
TK GLYEWLVM FGL+NAPSTFMR MN L+ C +FVVVYFD ILI+S+S DH DH++
Sbjct: 61 TKFGLYEWLVMPFGLTNAPSTFMRLMNHALRDCIGRFVVVYFDDILIYSQSLSDHVDHLR 120
Query: 121 AVFDVLRQNSYYMNVPK 137
V VLR N + NV K
Sbjct: 121 QVLLVLRDNHLFANVDK 137