BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0190.1
(112 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN76612.1 hypothetical protein VITISV_040104 [Vitis vinifera] 100 5e-25
XP_008351909.1 PREDICTED: transcription initiation factor TFIID ... 106 8e-25
XP_010692517.1 PREDICTED: uncharacterized protein LOC104905624 [... 103 1e-23
>CAN76612.1 hypothetical protein VITISV_040104 [Vitis vinifera]
Length = 127
Score = 100 bits (248), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 72/103 (69%)
Query: 2 IEKFNGKNDFSYWRMQMKNLLISQKLHKTLTGKKPEDMSDEDWEELDLEARATVMLCLER 61
+ KF+G +F W+ ++K+LL+ Q + K L GK+PE M++ DW++L+++ AT+ LCL
Sbjct: 11 VVKFDGFGNFDLWQRRVKDLLVQQGMVKALYGKQPEGMNNMDWKDLEVKVAATIRLCLAD 70
Query: 62 DVAFLVDGETTTASVWLKLESNFMMKTLTNRVYLKSKLFTCRM 104
DV + V E + ++WLKLES +M K LTN++YLK KL+ +M
Sbjct: 71 DVMYHVMDEESPTAIWLKLESQYMSKLLTNKLYLKQKLYGLKM 113
>XP_008351909.1 PREDICTED: transcription initiation factor TFIID subunit 2-like
[Malus domestica]
Length = 454
Score = 106 bits (264), Expect = 8e-25, Method: Composition-based stats.
Identities = 52/105 (49%), Positives = 73/105 (69%), Gaps = 2/105 (1%)
Query: 2 IEKFNGKNDFSYWRMQMKNLLISQKLHKTLTGKK--PEDMSDEDWEELDLEARATVMLCL 59
IEKFNG+NDFS WR++M+ +L+ Q L K L G + P+D S E+ E+ A + +ML L
Sbjct: 7 IEKFNGRNDFSLWRVKMRAVLVQQGLLKALQGVEALPQDWSAEEKEDALNRAHSAIMLSL 66
Query: 60 ERDVAFLVDGETTTASVWLKLESNFMMKTLTNRVYLKSKLFTCRM 104
+V ++ ETT A +WLKLES +M K+LTNR+YLK +L+T RM
Sbjct: 67 SDEVLREMENETTAAGLWLKLESIYMTKSLTNRLYLKQRLYTLRM 111
>XP_010692517.1 PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris
subsp. vulgaris]
Length = 2676
Score = 103 bits (258), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/106 (48%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
Query: 2 IEKFNGKNDFSYWRMQMKNLLISQKLHKTLTGK--KPEDMSDEDWEELDLEARATVMLCL 59
IEKF+ +F W+++MK LLI +HK L GK KP M++E WEELDL+A + LCL
Sbjct: 5 IEKFDRSINFGLWQVKMKALLIQNGVHKALEGKVKKPTTMTEEKWEELDLKALLAIQLCL 64
Query: 60 ERDVAFLVDGETTTASVWLKLESNFMMKTLTNRVYLKSKLFTCRME 105
+V V E ++A +WLKLES +M K++TNR+ LKS+L++ R+E
Sbjct: 65 SNEVLREVAKEDSSAGLWLKLESLYMAKSVTNRLLLKSRLYSLRLE 110