BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0200.1
(377 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP59893.1 Retrovirus-related Pol polyprotein from transposon TN... 288 8e-89
KYP71220.1 Retrovirus-related Pol polyprotein from transposon TN... 290 1e-88
KYP46254.1 Retrovirus-related Pol polyprotein from transposon TN... 287 2e-88
>KYP59893.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 593
Score = 288 bits (736), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 159/414 (38%), Positives = 242/414 (58%), Gaps = 53/414 (12%)
Query: 5 DSLSLEETRNSLLADNLRKVATSSMTSGGVDKDQAQGLFATRGRSNERGKGGKSRSKSRG 64
+ +++EE ++SL + LR A+++ S GV+ GL A +N + K + + K++
Sbjct: 155 ECITMEEVKSSLHSRELRFKASAN--SEGVN---GAGLLAFNSTTNGKKKKEQGKKKTKV 209
Query: 65 SFKKTCFSCGELGHFKAVCPKKKLKQKNEGYKGKQDIQDAGYVSEDPDECFSVTEVSENI 124
+ + C C E GH+K CPKK+ QK+ ++D S + + S+ + ++
Sbjct: 210 NPRDICNYCKEPGHWKKDCPKKR-NQKSVVVAAQED------SSFENELVLSIVDNHQHF 262
Query: 125 YDKWMLDSGASHHMCPNRKWFTTYRSIDGGIVIMGNDNICKTVGLETVRIKMHDGVVRTL 184
++W+LDSG S+HMCPNR WF TY GG V MGND CKT+ + T++IKMHDGV+RTL
Sbjct: 263 VEQWVLDSGCSYHMCPNRSWFLTYEKKFGGDVFMGNDMACKTISIGTIQIKMHDGVIRTL 322
Query: 185 TDVRHIPDLRKNLISLGVLERNGCKIIIENGSIKVVKGSLVVMRGTRYGNLYKLLGTTIK 244
T+VRH+PDL+KNLIS+GVL+ G K +E G +++ KGS +V+RG + GNLY L G+T
Sbjct: 323 TEVRHVPDLKKNLISVGVLDTKGFKCNVEGGVMEINKGSTIVIRGIKKGNLYMLQGSTNL 382
Query: 245 GDVAVGISRRDPTTCTKLWHMRLGHMSEKGLSLMCGKGLLKDIKKPCMEFCEHCVVGKAH 304
++ ++ + T+LWHMRLGHMSE+G+ ++ + LL+D ++FCEHCV+GK H
Sbjct: 383 ISESISVADKHTLDLTRLWHMRLGHMSERGMMVLSKQKLLRDHTVKELKFCEHCVLGKHH 442
Query: 305 TVTFSTSKHKSK-----------------------------------------EHKNEVF 323
F ++H +K +HKN+ F
Sbjct: 443 RSKFPKAQHTTKSTLDYVHSNCWGPSRVPSLGGGRYFLSIIDDYSRMTWIFIMKHKNQAF 502
Query: 324 NTFLVWKAMVENKTGRKLKTLRSDNGNEYKDGAFKEFCNQEGIVRHWTVVNTPQ 377
F WK +VEN+TG+++K LR+DN E+ F ++C +EGIVR +TV NTPQ
Sbjct: 503 KYFKEWKILVENQTGKRIKRLRTDNSLEFCSAEFNDYCKKEGIVRQYTVRNTPQ 556
>KYP71220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 290 bits (741), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/417 (40%), Positives = 233/417 (55%), Gaps = 54/417 (12%)
Query: 5 DSLSLEETRNSLLADNLRKVATSSMTSGGVDKDQAQGLFATRGRSNERGKGG--KSRSKS 62
D+LS E+ +++LL+ + S +D+ +GL + RGR+ E+G KSRSKS
Sbjct: 170 DTLSFEDVKSNLLSKEKFDLDIHS-------EDKGEGL-SVRGRTQEKGSTSNKKSRSKS 221
Query: 63 RG-SFKKTCFSCGELGHFKAVCPKKKLKQKNEGYKGKQDIQDAGYVSEDPDECFSVTEVS 121
RG KTC C + GH + C K KQ+ + KGK + A ++ +
Sbjct: 222 RGRKSNKTCRYCKKFGHDISDCFILKKKQERQE-KGKNPAEAANVETDSDGDVMISVSSD 280
Query: 122 ENIYDKWMLDSGASHHMCPNRKWFTTYRSIDGGIVIMGNDNICKTVGLETVRIKMHDGVV 181
+ +W+LDSG + HMCP + FTT +D G+V+MGND CK G+ T++IK HDG +
Sbjct: 281 KRSKTEWILDSGCTFHMCPYKDLFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTI 340
Query: 182 RTLTDVRHIPDLRKNLISLGVLERNGCKIIIENGSIKVVKGSLVVMRGTRYGNLYKLLGT 241
+TL++VR IPDL++NLISLG LE GCK E G +KV KG++V+++ R G+LY L G+
Sbjct: 341 KTLSNVRFIPDLKRNLISLGTLESLGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQGS 400
Query: 242 TIKGDVAVGISRRDPTTCTKLWHMRLGHMSEKGLSLMCGKGLLKDIKKPCMEFCEHCVVG 301
+ G AV S D TKLWHMRLGHMSEKG+ L+ +GLL + +EFCEHCV G
Sbjct: 401 IVTGSAAVSSSMSD-KDATKLWHMRLGHMSEKGMHLLSKQGLLGNQGIGKLEFCEHCVFG 459
Query: 302 KAHTVTFSTSKHKSK-----------------------------------------EHKN 320
K V+FST+ H++K HKN
Sbjct: 460 KQKRVSFSTATHRTKGTLDYIHSDLWGPSKVPSYGGCRYMMTIIDDFSRKVWVYFLRHKN 519
Query: 321 EVFNTFLVWKAMVENKTGRKLKTLRSDNGNEYKDGAFKEFCNQEGIVRHWTVVNTPQ 377
E F TF WK +VE +TG+K+K LR+DNG E+ +G F EFC GI RH T+ PQ
Sbjct: 520 ETFPTFKKWKTLVETQTGKKVKKLRTDNGLEFCEGDFNEFCANHGIARHKTIPGKPQ 576
>KYP46254.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 609
Score = 287 bits (734), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/414 (39%), Positives = 240/414 (57%), Gaps = 53/414 (12%)
Query: 5 DSLSLEETRNSLLADNLRKVATSSMTSGGVDKDQAQGLFATRGRSNERGKGGKSRSKSRG 64
+ +++EE ++SL + L A+++ S GV+ GL A N + K + + K++
Sbjct: 103 ECITMEEVKSSLHSRELWFKASAN--SEGVN---GAGLLAFNSTKNGKKKKEQGKKKTKV 157
Query: 65 SFKKTCFSCGELGHFKAVCPKKKLKQKNEGYKGKQDIQDAGYVSEDPDECFSVTEVSENI 124
+ + C C E GH+K CPKK+ QK+ ++D S + + S+ + ++
Sbjct: 158 NPRDICNYCKEPGHWKKDCPKKR-NQKSVAVAAQED------SSFENELVLSIVDNHQHS 210
Query: 125 YDKWMLDSGASHHMCPNRKWFTTYRSIDGGIVIMGNDNICKTVGLETVRIKMHDGVVRTL 184
++W+LDSG S+HMCPNR WF TY GG V MGND CKT+G+ T++IKMHDGV+RTL
Sbjct: 211 AEQWVLDSGCSYHMCPNRSWFLTYEKKSGGDVFMGNDMACKTIGIGTIQIKMHDGVIRTL 270
Query: 185 TDVRHIPDLRKNLISLGVLERNGCKIIIENGSIKVVKGSLVVMRGTRYGNLYKLLGTTIK 244
T+VRH+PDL+KNLIS+GVL G K +E G +++ KGS VV+RG + GNLY L G+T
Sbjct: 271 TEVRHVPDLKKNLISVGVLHTKGFKCNVEGGVMEISKGSTVVIRGIKKGNLYMLQGSTNL 330
Query: 245 GDVAVGISRRDPTTCTKLWHMRLGHMSEKGLSLMCGKGLLKDIKKPCMEFCEHCVVGKAH 304
+V ++ + T LWHMRLGHMSE+G+ ++ + LL D ++FCEHCVVGK H
Sbjct: 331 ISESVSVADKHTPDLTHLWHMRLGHMSERGMMVLRKQKLLGDHTVKELKFCEHCVVGKHH 390
Query: 305 TVTFSTSKHKSK-----------------------------------------EHKNEVF 323
+ F ++H +K +HKN+ F
Sbjct: 391 RIKFPKAQHTTKSTLDYVHSDCWGPSRVPSLGGGRYFLSIIDDYSGMTWIFIMKHKNQAF 450
Query: 324 NTFLVWKAMVENKTGRKLKTLRSDNGNEYKDGAFKEFCNQEGIVRHWTVVNTPQ 377
F WK +VEN+TG+++K LR+DNG E+ F ++C +EGIVR +TV NTPQ
Sbjct: 451 KYFKEWKILVENQTGKRIKRLRTDNGLEFCSAEFNDYCKKEGIVRQYTVRNTPQ 504