BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0210.1
(402 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP53356.1 Retrovirus-related Pol polyprotein from transposon TN... 423 e-142
KYP63120.1 Retrovirus-related Pol polyprotein from transposon TN... 415 e-139
AAT85194.1 putative polyprotein [Oryza sativa Japonica Group] 436 e-139
>KYP53356.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 503
Score = 423 bits (1087), Expect = e-142, Method: Compositional matrix adjust.
Identities = 215/405 (53%), Positives = 266/405 (65%), Gaps = 53/405 (13%)
Query: 1 LSIVAHGNLEVEQLDVKTVFLHRDLEEEIYMAQPEGYKVEGKENQVCRLRKSLYGLKQSP 60
L+ VA +LE+EQLDVKT FLH +LEEEIYM QPEG+ V KE+ VC+L+KSLYGLKQ+P
Sbjct: 80 LAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPSKEHLVCQLKKSLYGLKQAP 139
Query: 61 RQWYKRFDFFMLKYGFRRSDYDCCVYIKKLREGDFIYLLLYVDDMLIASRSMVDIDNLKS 120
RQWYK+FD FM+ G+ RS YD C+Y ++ +G FIYLLLYVDDMLIASR I LK+
Sbjct: 140 RQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASRDKSLISKLKA 199
Query: 121 QLSQEFEMKDMGAALKILRMEIKRKRSSKKLYLSQKGHIERVVFRFEMQNAKAVSTPLAP 180
QL+ EFEMK++GAA KIL MEI R R KL+LSQ+ +IER++ RF M N K VSTPLA
Sbjct: 200 QLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYIERLLDRFNMNNCKPVSTPLAA 259
Query: 181 HFRLSGRQSPTTTVEKDHMDRVPYGSAVGSLMYSMVCTRPDISQTVSVVSRFMANPGKTH 240
HF+LS P T E + M VPY SAVGSLMY+MVCTRPD++ VS+VSR+M NPGK H
Sbjct: 260 HFKLSSDLCPQTKEEMERMSHVPYASAVGSLMYAMVCTRPDLAYAVSMVSRYMHNPGKDH 319
Query: 241 WEAVKWVLRYLKGTVDTGLCFG---GDTCQLSSYVDSDYAGDLDKRPSTTGYVFRVHGAP 297
W AVKW+ RYLKGT + GL F T ++ +VDSDY GDLD+R S +GY+F + +
Sbjct: 320 WSAVKWIFRYLKGTSNIGLVFDRNKATTNNVAGFVDSDYGGDLDRRRSLSGYIFTLCNSA 379
Query: 298 VS--------------------------------------------------CQSAIHLA 307
+S QSAIHL
Sbjct: 380 ISWKASLQSIAALSTTEAEYVSATEGVKEALWIRGLVKELGLTQDVLTVFCDSQSAIHLT 439
Query: 308 KNQVHHARTNHIDVRYHFVRDVIKEGDVSLMKVHTDENPADMLTK 352
KN +H +T HIDV++HF+RD++ G+V L KVHT ENPADMLTK
Sbjct: 440 KNSRYHDKTKHIDVKHHFIRDIVTIGEVLLQKVHTSENPADMLTK 484
>KYP63120.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 501
Score = 415 bits (1067), Expect = e-139, Method: Compositional matrix adjust.
Identities = 208/404 (51%), Positives = 262/404 (64%), Gaps = 50/404 (12%)
Query: 1 LSIVAHGNLEVEQLDVKTVFLHRDLEEEIYMAQPEGYKVEGKENQVCRLRKSLYGLKQSP 60
L I A +LE+EQLDVKT FLH DLEEEI M QPEG+KV GK+N VCRL KSLYGLKQ+P
Sbjct: 79 LGIAATQDLEIEQLDVKTAFLHGDLEEEICMEQPEGFKVPGKQNLVCRLTKSLYGLKQAP 138
Query: 61 RQWYKRFDFFMLKYGFRRSDYDCCVYIKKLREGDFIYLLLYVDDMLIASRSMVDIDNLKS 120
RQWYK+F+FFM ++ F+R++ D CV+IK+ GDF+ LLLYVDDMLI + + I LK
Sbjct: 139 RQWYKKFEFFMAEHEFKRTESDHCVFIKRYASGDFLILLLYVDDMLIVGQDRIKIAALKK 198
Query: 121 QLSQEFEMKDMGAALKILRMEIKRKRSSKKLYLSQKGHIERVVFRFEMQNAKAVSTPLAP 180
LS+ F MKD+G A +IL M I R RS + L+LSQ+ +IE+V+ +F M K V+TPLA
Sbjct: 199 DLSKSFAMKDLGPAKQILGMRITRDRSKRLLWLSQERYIEKVLEQFNMDKCKPVNTPLAG 258
Query: 181 HFRLSGRQSPTTTVEKDHMDRVPYGSAVGSLMYSMVCTRPDISQTVSVVSRFMANPGKTH 240
HFRLS +QSPT+ E + M ++PY S VGSLMY+M+CTRPDI+ V VVSRF+ANPG H
Sbjct: 259 HFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDIAYAVGVVSRFLANPGNEH 318
Query: 241 WEAVKWVLRYLKGTVDTGLCFGGDTCQLSSYVDSDYAGDLDKRPSTTGYVFRVHGAPVSC 300
W AVKW+LRYL+GT LCFG L Y D+D AGD+D R ST+GY+ G VS
Sbjct: 319 WLAVKWILRYLRGTSKRCLCFGKGKPVLEGYTDADLAGDIDSRKSTSGYLTTFVGGAVSW 378
Query: 301 --------------------------------------------------QSAIHLAKNQ 310
QSAI+LAKN
Sbjct: 379 QSKLQKCVALSTTEAEYIAATEACKEMLWMKNMLLELGVDQERYVLKCDNQSAIYLAKNS 438
Query: 311 VHHARTNHIDVRYHFVRDVIKEGDVSLMKVHTDENPADMLTKVV 354
H+RT HID RYH++R+V++E + L KVHTDEN +DM+TKV+
Sbjct: 439 TFHSRTKHIDTRYHWIREVLEEKKLHLDKVHTDENWSDMMTKVI 482
>AAT85194.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 436 bits (1121), Expect = e-139, Method: Compositional matrix adjust.
Identities = 227/404 (56%), Positives = 272/404 (67%), Gaps = 51/404 (12%)
Query: 1 LSIVAHGNLEVEQLDVKTVFLHRDLEEEIYMAQPEGYKVEGKENQVCRLRKSLYGLKQSP 60
LSIVA + E+EQ+DVKT FLH +LEE+IYM QPEG+ V GKEN VCRL+KSLYGLKQSP
Sbjct: 823 LSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSP 882
Query: 61 RQWYKRFDFFMLKYGFRRSDYDCCVYIKKLREGDFIYLLLYVDDMLIASRSMVDIDNLKS 120
RQWYKRFD FML FRRS+YD CVY+K + +G IYLLLYVDDMLIA++ +I LK+
Sbjct: 883 RQWYKRFDSFMLSQKFRRSNYDSCVYLKVV-DGSAIYLLLYVDDMLIAAKDKSEIAKLKA 941
Query: 121 QLSQEFEMKDMGAALKILRMEIKRKRSSKKLYLSQKGHIERVVFRFEMQNAKAVSTPLAP 180
QLS EFEMKD+GAA KIL MEI R+R S KLYLSQK +IE+V+ RF M +AK VST LA
Sbjct: 942 QLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKCYIEKVLHRFNMHDAKLVSTLLAA 1001
Query: 181 HFRLSGRQSPTTTVEKDHMDRVPYGSAVGSLMYSMVCTRPDISQTVSVVSRFMANPGKTH 240
HFRLS P + + ++M RVPY SAV SLMY+MVC+RPD+S +SVVSR+MANPGK H
Sbjct: 1002 HFRLSSDLCPQSAYDIEYMSRVPYSSAVSSLMYAMVCSRPDLSHALSVVSRYMANPGKEH 1061
Query: 241 WEAVKWVLRYLKGTVDTGLCFGGDTCQLSSYVDSDYAGDLDKRPSTTGYVFRVHGAPVS- 299
W+AV+W+ RYL+GT L FG + L YVDSD+AGDLD+R S TGYVF V G VS
Sbjct: 1062 WKAVQWIFRYLRGTSSACLQFGRSSDGLVGYVDSDFAGDLDRRRSLTGYVFTVGGCAVSW 1121
Query: 300 -------------------------------------------------CQSAIHLAKNQ 310
QSAI L K+Q
Sbjct: 1122 KASLQATVALSTTEAEYMAISEACKEVIWLRGLYTELCGVTSCINIFCDSQSAICLTKDQ 1181
Query: 311 VHHARTNHIDVRYHFVRDVIKEGDVSLMKVHTDENPADMLTKVV 354
+ H RT HID+RYHF+R VI EGDV + K+ T +NP DM+TK V
Sbjct: 1182 MFHERTKHIDLRYHFIRGVIAEGDVKVCKISTHDNPVDMMTKPV 1225