BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g0400.1
(355 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_012459197.1 PREDICTED: zinc finger BED domain-containing prot... 116 6e-26
XP_012490886.1 PREDICTED: zinc finger BED domain-containing prot... 114 1e-25
XP_012490885.1 PREDICTED: zinc finger BED domain-containing prot... 114 2e-25
>XP_012459197.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER
2-like [Gossypium raimondii] XP_012459198.1 PREDICTED:
zinc finger BED domain-containing protein RICESLEEPER
2-like [Gossypium raimondii]
Length = 364
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 128/250 (51%), Gaps = 47/250 (18%)
Query: 5 FSKPFCEATTLFSGVEYVTLNPVLEYLVDIGMVFHDNQ--SNLLFPEITLSMESKFTKYW 62
F + F E T SG YVT N + L +I ++ D Q SN+ F + + M+ K+ KYW
Sbjct: 118 FLEHFYEVTLHISGTSYVTSNNFFDELSEIDILLRDAQLNSNIDFNVMAIKMKEKYDKYW 177
Query: 63 GE----NPVLFGVACILDPRIKMK-VDMVLSELENCFLSSVCAI---------------- 101
G+ N ++F VAC+LDPR K+K ++ LSE+ + C +
Sbjct: 178 GDIDKMNLLMF-VACVLDPRQKLKYLEFALSEMSSS--EKTCEMMQKLKESLYELFDEYK 234
Query: 102 -----KCSLSQSATMVS----------KLRESFAKEPLATASE----EMSRYDSEPGLLV 142
CS S +T VS +++ + K L E E+ +Y +E
Sbjct: 235 PPLHSTCSQSSVSTHVSIGEPQQKMKRRMQVLYKKRELEICGEDKTSELDKYLAEAN--E 292
Query: 143 DDLEKFNVLGWWSENEKRCPFLSRIARDVLVVTVSTVASESAFSLEKRILGDYRSTLTSE 202
+ +E F++L WW N R P LS+IARDVL + VSTVASESAFS R+L YRS+LT +
Sbjct: 293 EFVEDFDILLWWKVNSPRFPTLSKIARDVLAIPVSTVASESAFSTGGRVLDQYRSSLTRK 352
Query: 203 MLERLVKTTN 212
+++ LV T +
Sbjct: 353 IVQALVCTQD 362
>XP_012490886.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER
2-like isoform X2 [Gossypium raimondii]
Length = 345
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 128/253 (50%), Gaps = 47/253 (18%)
Query: 2 LCKFSKPFCEATTLFSGVEYVTLNPVLEYLVDIGMVFHDNQ--SNLLFPEITLSMESKFT 59
L F + F E T SG YVT N + L +I ++ D Q SN+ F + + M+ K+
Sbjct: 59 LRDFLEHFYEVTLRISGTSYVTSNNFFDELSEIDILLRDAQLNSNIDFNVMAIKMKEKYD 118
Query: 60 KYWGE----NPVLFGVACILDPRIKMK-VDMVLSELENCFLSSVCAI------------- 101
KYWG+ N ++F VAC+LDPR K+K ++ LSE+ + C +
Sbjct: 119 KYWGDIDKMNLLMF-VACVLDPRQKLKYLEFALSEMSSS--EKACEMMQKLKESLYELFD 175
Query: 102 --------KCSLSQSATMVS----------KLRESFAKEPLATASE----EMSRYDSEPG 139
CS S +T VS +++ + K L E E+ +Y +E
Sbjct: 176 EYKPPLHGTCSQSSVSTHVSIGEPQQKMKRRMQALYKKRELEICGEDKTSELDKYLAEAN 235
Query: 140 LLVDDLEKFNVLGWWSENEKRCPFLSRIARDVLVVTVSTVASESAFSLEKRILGDYRSTL 199
+ +E F++L WW N R P LS+IARDVL + V TVASESAFS R+L YRS+L
Sbjct: 236 --EEFVEDFDILLWWKVNSPRFPTLSKIARDVLAIPVFTVASESAFSTGGRVLDQYRSSL 293
Query: 200 TSEMLERLVKTTN 212
T ++++ LV T +
Sbjct: 294 TPKIVQALVCTQD 306
>XP_012490885.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER
2-like isoform X1 [Gossypium raimondii]
Length = 359
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 128/253 (50%), Gaps = 47/253 (18%)
Query: 2 LCKFSKPFCEATTLFSGVEYVTLNPVLEYLVDIGMVFHDNQ--SNLLFPEITLSMESKFT 59
L F + F E T SG YVT N + L +I ++ D Q SN+ F + + M+ K+
Sbjct: 59 LRDFLEHFYEVTLRISGTSYVTSNNFFDELSEIDILLRDAQLNSNIDFNVMAIKMKEKYD 118
Query: 60 KYWGE----NPVLFGVACILDPRIKMK-VDMVLSELENCFLSSVCAI------------- 101
KYWG+ N ++F VAC+LDPR K+K ++ LSE+ + C +
Sbjct: 119 KYWGDIDKMNLLMF-VACVLDPRQKLKYLEFALSEMSSS--EKACEMMQKLKESLYELFD 175
Query: 102 --------KCSLSQSATMVS----------KLRESFAKEPLATASE----EMSRYDSEPG 139
CS S +T VS +++ + K L E E+ +Y +E
Sbjct: 176 EYKPPLHGTCSQSSVSTHVSIGEPQQKMKRRMQALYKKRELEICGEDKTSELDKYLAEAN 235
Query: 140 LLVDDLEKFNVLGWWSENEKRCPFLSRIARDVLVVTVSTVASESAFSLEKRILGDYRSTL 199
+ +E F++L WW N R P LS+IARDVL + V TVASESAFS R+L YRS+L
Sbjct: 236 --EEFVEDFDILLWWKVNSPRFPTLSKIARDVLAIPVFTVASESAFSTGGRVLDQYRSSL 293
Query: 200 TSEMLERLVKTTN 212
T ++++ LV T +
Sbjct: 294 TPKIVQALVCTQD 306