BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g1050.1
(97 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010660329.1 PREDICTED: double-stranded RNA-binding protein 4 ... 85 1e-17
XP_002272597.2 PREDICTED: double-stranded RNA-binding protein 4 ... 85 1e-17
XP_010660325.1 PREDICTED: double-stranded RNA-binding protein 4 ... 85 1e-17
>XP_010660329.1 PREDICTED: double-stranded RNA-binding protein 4 isoform X2 [Vitis
vinifera]
Length = 357
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 52/70 (74%), Gaps = 3/70 (4%)
Query: 25 CKAILNEFAIKMSLPMPTYETKQMEGLLPAFTSSLEFDGKTYTSPVTPVCKSKKEAEQLL 84
CK+ILNEFA+KM+L PTY T Q EGLLP F SSL F+G TYT ++KKEAEQL
Sbjct: 108 CKSILNEFAVKMNLEKPTYTTVQPEGLLPVFVSSLVFNGVTYTGDAG---RNKKEAEQLA 164
Query: 85 ARTVLQSILG 94
ARTV+ SILG
Sbjct: 165 ARTVILSILG 174
>XP_002272597.2 PREDICTED: double-stranded RNA-binding protein 4 isoform X3 [Vitis
vinifera] XP_010660330.1 PREDICTED: double-stranded
RNA-binding protein 4 isoform X3 [Vitis vinifera]
CBI33535.3 unnamed protein product, partial [Vitis
vinifera]
Length = 333
Score = 84.7 bits (208), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 52/70 (74%), Gaps = 3/70 (4%)
Query: 25 CKAILNEFAIKMSLPMPTYETKQMEGLLPAFTSSLEFDGKTYTSPVTPVCKSKKEAEQLL 84
CK+ILNEFA+KM+L PTY T Q EGLLP F SSL F+G TYT ++KKEAEQL
Sbjct: 108 CKSILNEFAVKMNLEKPTYTTVQPEGLLPVFVSSLVFNGVTYTG---DAGRNKKEAEQLA 164
Query: 85 ARTVLQSILG 94
ARTV+ SILG
Sbjct: 165 ARTVILSILG 174
>XP_010660325.1 PREDICTED: double-stranded RNA-binding protein 4 isoform X1 [Vitis
vinifera] XP_010660326.1 PREDICTED: double-stranded
RNA-binding protein 4 isoform X1 [Vitis vinifera]
XP_010660327.1 PREDICTED: double-stranded RNA-binding
protein 4 isoform X1 [Vitis vinifera] XP_010660328.1
PREDICTED: double-stranded RNA-binding protein 4 isoform
X1 [Vitis vinifera]
Length = 357
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 52/70 (74%), Gaps = 3/70 (4%)
Query: 25 CKAILNEFAIKMSLPMPTYETKQMEGLLPAFTSSLEFDGKTYTSPVTPVCKSKKEAEQLL 84
CK+ILNEFA+KM+L PTY T Q EGLLP F SSL F+G TYT ++KKEAEQL
Sbjct: 108 CKSILNEFAVKMNLEKPTYTTVQPEGLLPVFVSSLVFNGVTYTGDAG---RNKKEAEQLA 164
Query: 85 ARTVLQSILG 94
ARTV+ SILG
Sbjct: 165 ARTVILSILG 174