BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g1120.1
(98 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU10726.1 hypothetical protein TSUD_424330, partial [Trifolium ... 57 4e-08
GAU32651.1 hypothetical protein TSUD_219010 [Trifolium subterran... 57 2e-07
GAU24969.1 hypothetical protein TSUD_312040 [Trifolium subterran... 54 2e-06
>GAU10726.1 hypothetical protein TSUD_424330, partial [Trifolium subterraneum]
Length = 180
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 17 QQEQPVEQRAQRSGRGGFRGRGRG----GRGRGRTSWNKE-VKCFKCLKFGHYATNCWQN 71
Q+EQ ++ G G RGRGRG GRGRGRTS +KE V+C+KC K GHY + C
Sbjct: 90 QEEQALKISNLGRGNGNTRGRGRGSFSRGRGRGRTSNSKEYVECYKCHKLGHYQSECLNW 149
Query: 72 GQQAQYAEQ--EDEEGMLL 88
+ A +A + E EE +L+
Sbjct: 150 EENANFAAEFNEHEEILLM 168
>GAU32651.1 hypothetical protein TSUD_219010 [Trifolium subterraneum]
Length = 350
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 17 QQEQPVEQRAQRSGRGGFRGRGR-GGRGRGRTSWNKE-VKCFKCLKFGHYATNC--WQNG 72
QQ Q EQ + S G RGRGR RGRGR NKE ++CFKC K GHY C W+
Sbjct: 164 QQVQAKEQALKVSNAG--RGRGRVSSRGRGRGRMNKELIECFKCHKLGHYRNECPEWEGN 221
Query: 73 QQAQYAEQEDEEGMLL 88
A YAE ++EE L+
Sbjct: 222 GNANYAELKEEEETLM 237
>GAU24969.1 hypothetical protein TSUD_312040 [Trifolium subterraneum]
Length = 1326
Score = 53.9 bits (128), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 30/48 (62%)
Query: 41 GRGRGRTSWNKEVKCFKCLKFGHYATNCWQNGQQAQYAEQEDEEGMLL 88
GRGRGR + ++CFKC K GHY + C G+ A YAE DEE LL
Sbjct: 232 GRGRGRQINKETIECFKCHKLGHYRSECPDWGENANYAEFNDEEETLL 279