BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000130.1_g1540.1
         (240 letters)

Database: ./nr 
           95,329,361 sequences; 35,143,497,570 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP76811.1 Retrovirus-related Pol polyprotein from transposon TN...   220   2e-62
KYP76810.1 Retrovirus-related Pol polyprotein from transposon TN...   220   2e-62
BAA11674.1 unnamed protein product [Nicotiana tabacum]                218   1e-61

>KYP76811.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1305

 Score =  220 bits (561), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 114/242 (47%), Positives = 163/242 (67%), Gaps = 29/242 (11%)

Query: 28  EKFGYRLWDPVDKNIIRSRDVVFLEYQTIEEFEKVEKHENHSDDLIDIDPHISSKVMHDN 87
           ++FGYRLWDP++K ++RSRDVVF E QTIE+ +  EK        +    H +++   DN
Sbjct: 665 DEFGYRLWDPINKKVVRSRDVVFFEDQTIEDIKNSEKPRLRKSTELTPVQHENNETHQDN 724

Query: 88  AGEE----------QNHEDEAHEDVLMSD-------------------DVEQRMEVQQEP 118
             EE          + H++ A ED   S                    + E+ + +  E 
Sbjct: 725 DPEEDEPVLEQSNQETHDEPAQEDPQSSSLPAPEPRRSSRERRPSTWYNTEEYVMLTDEG 784

Query: 119 PVECYEEALDDVHRKEWLKAMQDEIESLCKNNTFKLVENPKNKKILKNKWVFKIRTEERN 178
             + Y+EA+ D+H++EW KAMQ+E++SL +N+T++LVE PK ++ LKNKWV++I+TE+ N
Sbjct: 785 EPQSYKEAIKDIHKEEWRKAMQEEMQSLHENHTYELVELPKGRRALKNKWVYRIKTEDNN 844

Query: 179 SQPRYKARLVVKGFGQKKGIDFDEIFSPMVNMSSIRLVLGLVASMNLEIEQLDLKTAFLH 238
           ++PRYKARLVVKGFGQ+KGIDF+EIFSP+V MSSIR++LG+ A+ +LEIEQLD+KTAFLH
Sbjct: 845 TKPRYKARLVVKGFGQEKGIDFEEIFSPVVKMSSIRVILGIAATQDLEIEQLDVKTAFLH 904

Query: 239 GD 240
           GD
Sbjct: 905 GD 906


>KYP76810.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1305

 Score =  220 bits (561), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 114/242 (47%), Positives = 163/242 (67%), Gaps = 29/242 (11%)

Query: 28  EKFGYRLWDPVDKNIIRSRDVVFLEYQTIEEFEKVEKHENHSDDLIDIDPHISSKVMHDN 87
           ++FGYRLWDP++K ++RSRDVVF E QTIE+ +  EK        +    H +++   DN
Sbjct: 665 DEFGYRLWDPINKKVVRSRDVVFFEDQTIEDIKNSEKPRLRKSTELTPVQHENNETHQDN 724

Query: 88  AGEE----------QNHEDEAHEDVLMSD-------------------DVEQRMEVQQEP 118
             EE          + H++ A ED   S                    + E+ + +  E 
Sbjct: 725 DPEEDEPVLEQSNQETHDEPAQEDPQSSSLPAPEPRRSSRERRPSTWYNTEEYVMLTDEG 784

Query: 119 PVECYEEALDDVHRKEWLKAMQDEIESLCKNNTFKLVENPKNKKILKNKWVFKIRTEERN 178
             + Y+EA+ D+H++EW KAMQ+E++SL +N+T++LVE PK ++ LKNKWV++I+TE+ N
Sbjct: 785 EPQSYKEAIKDIHKEEWRKAMQEEMQSLHENHTYELVELPKGRRALKNKWVYRIKTEDNN 844

Query: 179 SQPRYKARLVVKGFGQKKGIDFDEIFSPMVNMSSIRLVLGLVASMNLEIEQLDLKTAFLH 238
           ++PRYKARLVVKGFGQ+KGIDF+EIFSP+V MSSIR++LG+ A+ +LEIEQLD+KTAFLH
Sbjct: 845 TKPRYKARLVVKGFGQEKGIDFEEIFSPVVKMSSIRVILGIAATQDLEIEQLDVKTAFLH 904

Query: 239 GD 240
           GD
Sbjct: 905 GD 906


>BAA11674.1 unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  218 bits (556), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 125/260 (48%), Positives = 166/260 (63%), Gaps = 45/260 (17%)

Query: 24  GYADEKFGYRLWDPVDKNIIRSRDVVFLEYQTIEEFEKVEKHENHS-------------- 69
           GY  +  GY+ +DPV+K ++RSRDVVF+E QTIE+ +KVEK  + S              
Sbjct: 675 GYGQDMLGYKFYDPVEKKLVRSRDVVFVEDQTIEDIDKVEKSTDDSAEFELPPTVVPRQV 734

Query: 70  -DDLIDIDPHISSKV----MHDNAGEEQNHEDEAHED------VLMSDDVEQRME--VQQ 116
            DD+ D  P          + D  G E N +D+A E+      +L +     R    VQQ
Sbjct: 735 GDDVQDNQPEAPGLPNEDELADTEGNEDNGDDDADEEDQPQPPILNNPPYHTRSGRVVQQ 794

Query: 117 ----------------EPPVECYEEALDDVHRKEWLKAMQDEIESLCKNNTFKLVENPKN 160
                           EP  + +EEA+DD H+++W++AMQDEI+SL +N TF+LV+ PK 
Sbjct: 795 STRYSPHEYVLLTDGGEP--DSFEEAIDDEHKEKWIEAMQDEIKSLHENKTFELVKLPKG 852

Query: 161 KKILKNKWVFKIRTEERNSQPRYKARLVVKGFGQKKGIDFDEIFSPMVNMSSIRLVLGLV 220
           K+ LKNKWVFK++ +E NS PR+KARLVVKGF Q+KGIDFDEIFSP+V M+SIR VLGL 
Sbjct: 853 KRALKNKWVFKMKHDEHNSLPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLGLA 912

Query: 221 ASMNLEIEQLDLKTAFLHGD 240
           AS+NLE+EQ+D+KTAFLHGD
Sbjct: 913 ASLNLEVEQMDVKTAFLHGD 932


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