BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000130.1_g1650.1
(154 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAB48346.1 reverse transcriptase, partial [Arabidopsis thaliana] 87 1e-18
XP_010673168.1 PREDICTED: uncharacterized protein LOC104889608 [... 91 1e-18
XP_012089475.1 PREDICTED: uncharacterized protein LOC105647861 [... 86 1e-16
>AAB48346.1 reverse transcriptase, partial [Arabidopsis thaliana]
Length = 199
Score = 87.4 bits (215), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 78/136 (57%), Gaps = 4/136 (2%)
Query: 21 SSSVCLNGRASIHSSRPKPIIPTSAYSLKPKVLKPQHTSD-RSVFLIPLTR--LSPNFFN 77
+ VCL R S I + L PK++ P+H SD R + L + +S
Sbjct: 20 GNDVCLMVRHFFESDVMDNQINQTQICLIPKIIDPKHMSDYRPISLCTASYKIISKILIK 79
Query: 78 RLKTTLPDIISLFQAAYIPGRQITDNIITSQELVHSSKKIKGGKS-YFRLKLDMFEAFDT 136
RLK L D+IS QAA++PGR I+DN++ + EL+HS K + +S Y +K D+ +A+D
Sbjct: 80 RLKQCLGDVISDSQAAFVPGRNISDNVLVAHELLHSLKSRRECQSGYVAVKTDISKAYDR 139
Query: 137 IEWNYIGIIMSKLGFS 152
+EWN++ +M +LGF+
Sbjct: 140 VEWNFLEKVMIQLGFA 155
>XP_010673168.1 PREDICTED: uncharacterized protein LOC104889608 [Beta vulgaris
subsp. vulgaris]
Length = 1712
Score = 91.3 bits (225), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 78/126 (61%), Gaps = 4/126 (3%)
Query: 32 IHSSRPKPIIPTSAYSLKPKVLKPQHTSD-RSVFL--IPLTRLSPNFFNRLKTTLPDIIS 88
IH +RP + + +L PKV P S+ R + L + ++ NRLKT LP ++S
Sbjct: 862 IHGTRPPDALNNTNIALIPKVKSPTLVSEFRPISLCNVIFKLVTKVLANRLKTILPGVVS 921
Query: 89 LFQAAYIPGRQITDNIITSQELVHSSK-KIKGGKSYFRLKLDMFEAFDTIEWNYIGIIMS 147
Q+A++PGR ITDN + + EL HS K + KG + + +KLDM +A+D +EW+++ ++
Sbjct: 922 ENQSAFVPGRLITDNALIALELFHSMKYRCKGNRGFVAMKLDMSKAYDRVEWSFLRSLLD 981
Query: 148 KLGFSN 153
K+GF++
Sbjct: 982 KMGFAD 987
>XP_012089475.1 PREDICTED: uncharacterized protein LOC105647861 [Jatropha curcas]
Length = 1170
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/121 (41%), Positives = 73/121 (60%), Gaps = 8/121 (6%)
Query: 40 IIPTSAYS----LKPKVLKPQHTSD-RSVFL--IPLTRLSPNFFNRLKTTLPDIISLFQA 92
I PTS L PK++ P+ D R + L + +S NRLK LP +IS Q+
Sbjct: 427 IFPTSLSDTLIVLIPKIVDPKEAKDFRPIALCNVLYKIVSKVLANRLKIVLPKVISEHQS 486
Query: 93 AYIPGRQITDNIITSQELVHSSKKIKG-GKSYFRLKLDMFEAFDTIEWNYIGIIMSKLGF 151
A+IPGR ITDNI+ S E++H+ K+ K G +K+D+ +A+D ++WNY+ +M KLGF
Sbjct: 487 AFIPGRAITDNILVSFEMMHNLKRQKRCGMGSCAMKIDISKAYDRVDWNYLWAVMLKLGF 546
Query: 152 S 152
S
Sbjct: 547 S 547