Eca_sc000058.1_g3490.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010277322.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 331 1 319 e-178 162.83 72.20 84.89
Subject 539 203 521
Annot PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera] XP_010277323.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera] XP_010277324.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera] XP_010277325.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera] XP_010277326.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera]
araport AT5G66520.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 331 1 320 e-107 187.31 45.61 67.97
Subject 620 207 526
Annot | Tetratricopeptide repeat (TPR)-like superfamily protein | Chr5:26551879-26553741 FORWARD LENGTH=620 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPfam PF13041 PPR_2 5 41 5.3e-10 IPR002885
HMMPfam PF13041 PPR_2 106 153 6.5e-12 IPR002885
HMMPfam PF01535 PPR 80 106 0.00019 IPR002885
HMMPfam PF01535 PPR 180 205 0.00038 IPR002885
ProfileScan PS51375 PPR 5 39 12.299 IPR002885
ProfileScan PS51375 PPR 106 140 11.794 IPR002885
ProfileScan PS51375 PPR 75 105 8.320 IPR002885
ProfileScan PS51375 PPR 141 176 8.561 IPR002885
ProfileScan PS51375 PPR 177 207 8.265 IPR002885
ProfileScan PS51375 PPR 243 277 6.401 IPR002885
ProfileScan PS51375 PPR 209 239 5.744 IPR002885
HMMPanther PTHR24015:SF136 SUBFAMILY NOT NAMED 1 326 1.2e-155 NULL
HMMPanther PTHR24015 FAMILY NOT NAMED 1 326 1.2e-155 NULL
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 7 40 2.2e-08 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 80 107 3.6e-05 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 109 141 3.2e-06 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 143 177 2.7e-05 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 181 205 0.00025 IPR002885

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