Eca_sc000072.1_g0550.1
Sequence
Init: Term:
reverse complement
BLAST
nr JAT57914.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 381 1 378 e-100 138.84 50.39 65.87
Subject 529 23 431
Annot Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Anthurium amnicola]
araport # Length Start End E-value Length(%) Iden(%) Posi(%)
Query # # # # # # #
Subject # # #
Annot
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 67 376 1.3e-54 NULL
superfamily SSF57756 Retrovirus zinc finger-like domains 151 202 1.5e-07 IPR001878
ProfileScan PS50158 ZF_CCHC 175 191 10.460 IPR001878
Gene3D G3DSA:4.10.60.10 no description 167 195 1.1e-07 IPR001878
HMMPfam PF14227 UBN2_2 67 145 3.3e-21 NULL
HMMPfam PF13976 gag_pre-integrs 339 377 2.7e-08 IPR025724
HMMPfam PF00098 zf-CCHC 175 191 2.5e-06 IPR001878
HMMSmart SM00343 zinc finger 175 191 4.7e-05 IPR001878

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