Eca_sc000081.1_g2630.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010278986.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 693 26 690 0.0 106.34 70.41 80.37
Subject 737 28 735
Annot PREDICTED: zinc finger CCCH domain-containing protein 30-like [Nelumbo nucifera]
araport AT2G41900.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 693 1 690 0.0 103.31 58.58 72.00
Subject 716 1 711
Annot | CCCH-type zinc finger protein with ARM repeat domain-containing protein | Chr2:17491352-17493502 FORWARD LENGTH=716 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMSmart SM00248 ankyrin repeats 85 115 0.032 IPR002110
HMMSmart SM00248 ankyrin repeats 120 152 0.0013 IPR002110
HMMSmart SM00356 zinc finger 300 326 7.8e-05 IPR000571
HMMPfam PF12796 Ank_2 86 153 2.5e-11 IPR020683
HMMPfam PF00642 zf-CCCH 305 325 5.1e-05 IPR000571
HMMPanther PTHR14493:SF18 PEI1, NUCLEIC ACID BINDING / TRANSCRIPTION FACTOR 31 659 1.6e-225 NULL
HMMPanther PTHR14493 UNCHARACTERIZED 31 659 1.6e-225 NULL
Gene3D G3DSA:1.25.40.20 no description 31 165 1.2e-15 IPR020683
superfamily SSF48403 Ankyrin repeat 31 178 4.2e-15 IPR020683
superfamily SSF90229 CCCH zinc finger 295 328 0.0026 NULL
superfamily SSF90229 CCCH zinc finger 330 365 0.0077 NULL
ProfileScan PS50088 ANK_REPEAT 120 155 11.541 IPR002110
ProfileScan PS50103 ZF_C3H1 305 327 12.756 IPR000571
ProfileScan PS50297 ANK_REP_REGION 85 160 14.849 IPR020683

Top