Eca_sc000102.1_g1010.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010250034.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 623 22 620 0.0 101.44 58.58 74.79
Subject 632 33 630
Annot PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Nelumbo nucifera]
araport AT3G08820.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 623 22 622 e-121 109.95 33.06 53.13
Subject 685 8 594
Annot | Pentatricopeptide repeat (PPR) superfamily protein | Chr3:2677122-2679179 REVERSE LENGTH=685 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPfam PF13041 PPR_2 405 453 8.8e-12 IPR002885
HMMPfam PF01535 PPR 190 218 0.00019 IPR002885
HMMPfam PF01535 PPR 269 295 0.018 IPR002885
HMMPfam PF01535 PPR 304 328 6.2e-05 IPR002885
HMMPfam PF01535 PPR 550 575 0.39 IPR002885
HMMPfam PF13812 PPR_3 478 505 0.0095 IPR002885
ProfileScan PS51375 PPR 85 119 7.509 IPR002885
ProfileScan PS51375 PPR 188 222 9.328 IPR002885
ProfileScan PS51375 PPR 155 186 6.982 IPR002885
ProfileScan PS51375 PPR 120 154 6.950 IPR002885
ProfileScan PS51375 PPR 300 334 8.133 IPR002885
ProfileScan PS51375 PPR 264 298 6.895 IPR002885
ProfileScan PS51375 PPR 336 370 7.136 IPR002885
ProfileScan PS51375 PPR 406 440 11.772 IPR002885
ProfileScan PS51375 PPR 375 405 7.267 IPR002885
ProfileScan PS51375 PPR 441 475 8.999 IPR002885
ProfileScan PS51375 PPR 477 507 6.467 IPR002885
ProfileScan PS51375 PPR 509 539 5.678 IPR002885
ProfileScan PS51375 PPR 543 577 8.703 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 190 223 4e-07 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 304 329 6.4e-05 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 408 442 6.3e-05 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 444 470 0.0022 IPR002885
Gene3D G3DSA:1.25.40.10 no description 528 570 5e-06 IPR011990
HMMPanther PTHR24015:SF61 PGR3 (PROTON GRADIENT REGULATION 3) 21 622 2.9e-182 NULL
HMMPanther PTHR24015 FAMILY NOT NAMED 21 622 2.9e-182 NULL

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