Eca_sc000113.1_g0030.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_002314297.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 595 34 595 0.0 100.67 83.02 90.08
Subject 599 38 599
Annot ABC transporter family protein [Populus trichocarpa] EEE88252.1 ABC transporter family protein [Populus trichocarpa]
araport AT5G60790.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 595 36 595 0.0 100 79.83 86.89
Subject 595 37 595
Annot | ABC transporter family protein | Chr5:24453760-24455767 REVERSE LENGTH=595 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
ProfileScan PS50893 ABC_TRANSPORTER_2 69 309 14.946 IPR003439
ProfileScan PS50893 ABC_TRANSPORTER_2 380 595 15.460 IPR003439
HMMPfam PF00005 ABC_tran 87 241 4e-22 IPR003439
HMMPfam PF00005 ABC_tran 396 527 1.3e-23 IPR003439
HMMPfam PF12848 ABC_tran_2 280 357 3.8e-21 NULL
HMMPanther PTHR19211:SF15 ATP-BINDING CASSETTE, SUB-FAMILY F (GCN20), MEMBER 2 4 590 0 NULL
HMMPanther PTHR19211 ATP-BINDING TRANSPORT PROTEIN-RELATED 4 590 0 NULL
superfamily SSF52540 P-loop containing nucleoside triphosphate hydrolases 385 577 2.9e-43 IPR027417
superfamily SSF52540 P-loop containing nucleoside triphosphate hydrolases 69 333 2.6e-41 IPR027417
HMMSmart SM00382 ATPases associated with a variety of cellula 93 295 4.3e-08 IPR003593
HMMSmart SM00382 ATPases associated with a variety of cellula 405 572 0.0002 IPR003593
Gene3D G3DSA:3.40.50.300 no description 69 327 1.8e-42 NULL
Gene3D G3DSA:3.40.50.300 no description 378 576 3.3e-39 NULL
Coil coil coiled-coil 145 166 NA NULL
PatternScan PS00211 ABC_TRANSPORTER_1 213 227 NA IPR017871

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