Eca_sc000118.1_g1330.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010245112.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 580 39 578 0.0 95.86 58.27 70.17
Subject 556 11 549
Annot PREDICTED: putative pentatricopeptide repeat-containing protein At5g37570 isoform X2 [Nelumbo nucifera]
araport AT5G37570.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 580 42 570 e-132 94.82 34.13 54.13
Subject 550 16 547
Annot | Pentatricopeptide repeat (PPR-like) superfamily protein | Chr5:14924494-14926146 REVERSE LENGTH=550 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
superfamily SSF48452 TPR-like 367 555 0.00016 NULL
superfamily SSF48452 TPR-like 195 319 0.019 NULL
Gene3D G3DSA:1.25.40.10 no description 98 308 5.5e-06 IPR011990
Gene3D G3DSA:1.25.40.10 no description 493 552 1.2e-07 IPR011990
ProfileScan PS51375 PPR 98 132 10.643 IPR002885
ProfileScan PS51375 PPR 230 264 10.446 IPR002885
ProfileScan PS51375 PPR 199 229 9.931 IPR002885
ProfileScan PS51375 PPR 168 198 8.638 IPR002885
ProfileScan PS51375 PPR 133 167 6.226 IPR002885
ProfileScan PS51375 PPR 292 326 10.665 IPR002885
ProfileScan PS51375 PPR 265 291 6.149 IPR002885
ProfileScan PS51375 PPR 393 427 11.926 IPR002885
ProfileScan PS51375 PPR 362 392 8.068 IPR002885
ProfileScan PS51375 PPR 428 462 8.342 IPR002885
ProfileScan PS51375 PPR 464 494 6.643 IPR002885
ProfileScan PS51375 PPR 530 564 8.572 IPR002885
HMMPfam PF01535 PPR 101 128 0.00021 IPR002885
HMMPfam PF01535 PPR 232 261 2.6e-05 IPR002885
HMMPfam PF01535 PPR 263 289 5.5e-06 IPR002885
HMMPfam PF01535 PPR 468 491 0.14 IPR002885
HMMPfam PF01535 PPR 535 561 0.035 IPR002885
HMMPfam PF13041 PPR_2 293 337 2.4e-07 IPR002885
HMMPfam PF13041 PPR_2 392 440 1.8e-10 IPR002885
HMMPfam PF12854 PPR_1 199 227 1.7e-07 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 101 133 5.5e-05 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 172 200 0.00013 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 232 260 4.5e-05 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 263 288 7.5e-05 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 295 328 2.9e-08 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 395 429 5.1e-07 IPR002885
HMMPanther PTHR24015:SF136 SUBFAMILY NOT NAMED 30 577 1.8e-190 NULL
HMMPanther PTHR24015 FAMILY NOT NAMED 30 577 1.8e-190 NULL

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