Eca_sc000010.1_g0030.1
Sequence
Init: Term:
reverse complement
BLAST
nr GAU17808.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1454 517 1422 e-156 95.66 22.42 33.35
Subject 1391 149 1083
Annot hypothetical protein TSUD_171970 [Trifolium subterraneum]
araport AT4G29090.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1454 1187 1416 8e-25 39.54 4.95 8.73
Subject 575 2 241
Annot | Ribonuclease H-like superfamily protein | Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPanther PTHR19446:SF34 NON-LTR RETROELEMENT REVERSE TRANSCRIPTASE RELATED 567 1389 3.9e-155 NULL
HMMPanther PTHR19446 REVERSE TRANSCRIPTASES 567 1389 3.9e-155 NULL
HMMPfam PF00078 RVT_1 883 1110 7.2e-41 IPR000477
HMMPfam PF14111 DUF4283 53 191 9e-24 IPR025558
HMMPfam PF03372 Exo_endo_phos 560 766 6.1e-13 IPR005135
HMMPfam PF14392 zf-CCHC_4 193 240 9.3e-11 IPR025836
Gene3D G3DSA:3.60.10.10 no description 559 772 7e-22 IPR005135
superfamily SSF56219 DNase I-like 557 774 7.2e-32 IPR005135
superfamily SSF56672 DNA/RNA polymerases 827 1109 2.6e-17 NULL
ProfileScan PS50158 ZF_CCHC 226 239 9.883 IPR001878
ProfileScan PS50878 RT_POL 863 1143 15.927 IPR000477

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