Eca_sc000010.1_g0380.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010256585.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 687 1 687 0.0 108.00 74.23 86.31
Subject 742 57 742
Annot PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic [Nelumbo nucifera]
araport AT2G29760.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 687 1 687 0.0 107.42 62.59 78.89
Subject 738 53 738
Annot | Tetratricopeptide repeat (TPR)-like superfamily protein | Chr2:12712884-12715100 FORWARD LENGTH=738 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 147 180 3.6e-09 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 248 278 7.1e-05 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 381 415 2.2e-06 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 416 443 0.0022 IPR002885
HMMPanther PTHR24015:SF78 SUBFAMILY NOT NAMED 6 687 0 NULL
HMMPanther PTHR24015 FAMILY NOT NAMED 6 687 0 NULL
HMMPfam PF13041 PPR_2 145 193 9.5e-14 IPR002885
HMMPfam PF13041 PPR_2 378 426 8.1e-10 IPR002885
HMMPfam PF01535 PPR 45 71 0.0089 IPR002885
HMMPfam PF01535 PPR 118 145 0.032 IPR002885
HMMPfam PF01535 PPR 220 245 0.00076 IPR002885
HMMPfam PF01535 PPR 248 276 0.00025 IPR002885
HMMPfam PF01535 PPR 280 305 0.00066 IPR002885
HMMPfam PF01535 PPR 353 373 0.0005 IPR002885
HMMPfam PF01535 PPR 454 477 0.0043 IPR002885
HMMPfam PF01535 PPR 520 548 0.041 IPR002885
HMMPfam PF14432 DYW_deaminase 559 677 3.3e-16 NULL
Gene3D G3DSA:1.25.40.10 no description 355 433 1.4e-12 IPR011990
Gene3D G3DSA:1.25.40.10 no description 434 535 2.1e-05 IPR011990
superfamily SSF48452 TPR-like 348 532 5.7e-07 NULL
superfamily SSF48452 TPR-like 35 535 1.7e-06 NULL
ProfileScan PS51375 PPR 43 77 9.219 IPR002885
ProfileScan PS51375 PPR 145 179 13.735 IPR002885
ProfileScan PS51375 PPR 114 144 8.451 IPR002885
ProfileScan PS51375 PPR 246 280 10.128 IPR002885
ProfileScan PS51375 PPR 215 245 8.572 IPR002885
ProfileScan PS51375 PPR 180 214 5.733 IPR002885
ProfileScan PS51375 PPR 281 312 6.138 IPR002885
ProfileScan PS51375 PPR 379 413 10.950 IPR002885
ProfileScan PS51375 PPR 348 378 7.815 IPR002885
ProfileScan PS51375 PPR 313 347 6.445 IPR002885
ProfileScan PS51375 PPR 414 449 8.133 IPR002885
ProfileScan PS51375 PPR 450 480 7.530 IPR002885
ProfileScan PS51375 PPR 516 550 8.616 IPR002885

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