Eca_sc000010.1_g0470.1
Sequence
Init: Term:
reverse complement
BLAST
nr KYP64439.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 691 54 690 0.0 167.58 48.62 65.41
Subject 1158 2 715
Annot Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]
araport AT1G21280.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 691 43 196 2e-13 34.29 7.09 10.85
Subject 237 41 229
Annot | Copia-like polyprotein/retrotransposon | Chr1:7447690-7448403 REVERSE LENGTH=237 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPanther PTHR11439:SF127 PREDICTED PROTEIN (FRAGMENT) 38 691 5.5e-132 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 38 691 5.5e-132 NULL
HMMPfam PF14244 UBN2_3 36 164 2.3e-38 NULL
HMMPfam PF00665 rve 460 574 1.8e-33 IPR001584
HMMPfam PF13976 gag_pre-integrs 378 445 1.1e-16 IPR025724
Gene3D G3DSA:3.30.420.10 no description 459 614 5.2e-35 NULL
superfamily SSF53098 Ribonuclease H-like 453 627 1.5e-46 IPR012337
ProfileScan PS50994 INTEGRASE 456 622 23.460 IPR001584

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