Eca_sc000033.1_g0170.1
Sequence
Init: Term:
reverse complement
BLAST
nr CCA66050.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1316 1 1016 e-178 103.11 25.07 39.89
Subject 1357 1 1024
Annot hypothetical protein [Beta vulgaris subsp. vulgaris]
araport AT4G24972.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1316 1151 1316 6e-47 13.37 6.83 8.66
Subject 176 1 175
Annot | tapetum determinant 1 | Chr4:12838220-12839619 FORWARD LENGTH=176 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
ProfileScan PS50878 RT_POL 472 753 16.727 IPR000477
HMMPfam PF00078 RVT_1 495 727 1.3e-39 IPR000477
HMMPfam PF03372 Exo_endo_phos 5 223 5e-09 IPR005135
HMMPanther PTHR19446:SF34 NON-LTR RETROELEMENT REVERSE TRANSCRIPTASE RELATED 26 1177 5.3e-187 NULL
HMMPanther PTHR19446 REVERSE TRANSCRIPTASES 26 1177 5.3e-187 NULL
superfamily SSF56219 DNase I-like 1 231 1e-35 IPR005135
superfamily SSF56672 DNA/RNA polymerases 434 705 7.4e-10 NULL
Gene3D G3DSA:3.60.10.10 no description 1 231 1.2e-19 IPR005135

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