Eca_sc000034.1_g0830.1
Sequence
Init: Term:
reverse complement
BLAST
nr CAN66637.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1328 10 1324 0.0 99.09 62.34 77.25
Subject 1316 30 1313
Annot hypothetical protein VITISV_011340 [Vitis vinifera]
araport AT4G23160.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1328 814 1309 e-103 78.53 14.38 23.26
Subject 1043 85 579
Annot | cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPfam PF07727 RVT_2 844 1088 5.3e-97 IPR013103
HMMPfam PF00665 rve 513 629 3.1e-31 IPR001584
HMMPfam PF14227 UBN2_2 99 212 5.5e-17 NULL
HMMPfam PF13976 gag_pre-integrs 429 501 2.4e-14 IPR025724
HMMPfam PF00098 zf-CCHC 247 263 6.6e-07 IPR001878
superfamily SSF53098 Ribonuclease H-like 508 675 3.3e-45 IPR012337
superfamily SSF56672 DNA/RNA polymerases 843 1280 7.2e-32 NULL
superfamily SSF57756 Retrovirus zinc finger-like domains 220 278 4.4e-06 IPR001878
HMMSmart SM00343 zinc finger 247 263 6e-06 IPR001878
ProfileScan PS50158 ZF_CCHC 248 263 11.235 IPR001878
ProfileScan PS50994 INTEGRASE 511 675 25.964 IPR001584
Gene3D G3DSA:4.10.60.10 no description 230 264 0.00013 IPR001878
Gene3D G3DSA:3.30.420.10 no description 513 668 2.6e-32 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 27 1322 0 NULL

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