Eca_sc000034.1_g1560.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_008377550.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 307 1 307 e-124 258.30 58.95 72.63
Subject 793 425 731
Annot PREDICTED: uncharacterized protein LOC103440632 [Malus domestica]
araport ATMG00300.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 307 101 192 6e-11 47.23 11.07 16.93
Subject 145 45 141
Annot | Gag-Pol-related retrotransposon family protein | ChrM:89617-90054 REVERSE LENGTH=145 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPfam PF00665 rve 178 292 1.2e-31 IPR001584
HMMPfam PF13976 gag_pre-integrs 96 163 1.3e-17 IPR025724
ProfileScan PS50994 INTEGRASE 174 307 18.341 IPR001584
superfamily SSF53098 Ribonuclease H-like 171 307 1.5e-36 IPR012337
Gene3D G3DSA:3.30.420.10 no description 177 299 1.7e-28 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 23 303 1.6e-85 NULL

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