Eca_sc000042.1_g0170.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_008245529.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1051 128 854 e-126 164.12 24.54 40.34
Subject 1725 554 1324
Annot PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103343662 [Prunus mume]
araport AT5G06370.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1051 1 131 1e-67 24.64 9.51 10.84
Subject 259 1 130
Annot | NC domain-containing protein-like protein | Chr5:1947299-1948432 REVERSE LENGTH=259 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
superfamily SSF100950 NagB/RpiA/CoA transferase-like 934 1043 2.6e-25 NULL
superfamily SSF53098 Ribonuclease H-like 773 903 1.3e-13 IPR012337
superfamily SSF56672 DNA/RNA polymerases 166 369 2.8e-07 NULL
HMMPfam PF00078 RVT_1 157 345 1.4e-32 IPR000477
HMMPfam PF06026 Rib_5-P_isom_A 985 1044 7.7e-20 IPR004788
HMMPfam PF13456 RVT_3 818 903 6.4e-15 NULL
HMMPfam PF04970 LRAT 10 106 2.4e-14 IPR007053
HMMPfam PF13966 zf-RVT 595 682 2.2e-10 IPR026960
Gene3D G3DSA:3.90.1720.10 no description 6 48 0.0006 IPR000064
Gene3D G3DSA:3.30.420.10 no description 774 901 7.3e-05 NULL
Gene3D G3DSA:3.40.50.1360 no description 939 1044 5.5e-34 NULL
HMMPanther PTHR19446:SF34 NON-LTR RETROELEMENT REVERSE TRANSCRIPTASE RELATED 133 737 1.7e-82 NULL
HMMPanther PTHR19446 REVERSE TRANSCRIPTASES 133 737 1.7e-82 NULL
ProfileScan PS50878 RT_POL 1 348 12.176 IPR000477
ProfileScan PS50879 RNASE_H 790 907 8.992 IPR002156

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