Eca_sc000051.1_g0270.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010254581.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1468 748 1468 0.0 48.97 31.94 39.16
Subject 719 14 719
Annot PREDICTED: pentatricopeptide repeat-containing protein At5g65570 [Nelumbo nucifera]
araport AT5G65570.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1468 795 1468 0.0 50.27 25.74 34.87
Subject 738 67 738
Annot | Tetratricopeptide repeat (TPR)-like superfamily protein | Chr5:26203968-26206184 FORWARD LENGTH=738 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 831 858 0.0031 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 859 892 3e-07 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 964 994 0.0002 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 1062 1096 0.00021 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 1163 1196 2.5e-06 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 1236 1260 0.00055 IPR002885
superfamily SSF48452 TPR-like 1242 1316 0.00039 NULL
superfamily SSF48452 TPR-like 1034 1316 0.00043 NULL
superfamily SSF48452 TPR-like 831 984 0.013 NULL
HMMPfam PF13041 PPR_2 857 904 1.4e-11 IPR002885
HMMPfam PF13041 PPR_2 1060 1106 5.6e-09 IPR002885
HMMPfam PF13041 PPR_2 1161 1207 1.1e-09 IPR002885
HMMPfam PF01535 PPR 831 855 0.016 IPR002885
HMMPfam PF01535 PPR 963 991 0.00021 IPR002885
HMMPfam PF01535 PPR 1034 1054 0.67 IPR002885
HMMPfam PF01535 PPR 1135 1158 0.64 IPR002885
HMMPfam PF01535 PPR 1235 1260 0.00042 IPR002885
HMMPfam PF10551 MULE 409 496 5.5e-22 IPR018289
HMMPfam PF03101 FAR1 197 284 1e-21 IPR004330
HMMPfam PF14432 DYW_deaminase 1342 1458 3e-15 NULL
HMMPfam PF06200 tify 61 93 5.3e-08 IPR010399
Gene3D G3DSA:1.25.40.10 no description 1226 1317 8.2e-08 IPR011990
HMMPanther PTHR24015:SF169 PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN 811 1468 7.5e-282 NULL
HMMPanther PTHR24015 FAMILY NOT NAMED 811 1468 7.5e-282 NULL
ProfileScan PS51320 TIFY 59 94 12.452 IPR010399
ProfileScan PS51375 PPR 857 891 10.786 IPR002885
ProfileScan PS51375 PPR 826 856 7.114 IPR002885
ProfileScan PS51375 PPR 892 926 8.506 IPR002885
ProfileScan PS51375 PPR 959 993 10.457 IPR002885
ProfileScan PS51375 PPR 928 958 6.599 IPR002885
ProfileScan PS51375 PPR 994 1028 6.358 IPR002885
ProfileScan PS51375 PPR 1060 1094 10.589 IPR002885
ProfileScan PS51375 PPR 1029 1059 6.040 IPR002885
ProfileScan PS51375 PPR 1095 1129 6.369 IPR002885
ProfileScan PS51375 PPR 1161 1195 11.882 IPR002885
ProfileScan PS51375 PPR 1130 1160 6.708 IPR002885
ProfileScan PS51375 PPR 1196 1226 8.572 IPR002885
ProfileScan PS51375 PPR 1232 1266 8.714 IPR002885
ProfileScan PS51375 PPR 1297 1331 6.445 IPR002885
HMMSmart SM00979 no description 59 94 3.1e-08 IPR010399

Top