Eca_sc000051.1_g0590.1
Sequence
Init: Term:
reverse complement
BLAST
nr KYP71220.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 285 1 271 e-107 242.10 54.73 69.12
Subject 690 386 657
Annot Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]
araport ATMG00300.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 285 1 107 5e-28 50.87 16.49 24.21
Subject 145 39 142
Annot | Gag-Pol-related retrotransposon family protein | ChrM:89617-90054 REVERSE LENGTH=145 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
Gene3D G3DSA:3.30.420.10 no description 88 247 8.4e-36 NULL
superfamily SSF53098 Ribonuclease H-like 85 258 5.4e-46 IPR012337
HMMPfam PF00665 rve 90 207 1.2e-31 IPR001584
HMMPfam PF13976 gag_pre-integrs 8 76 8e-13 IPR025724
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 33 271 1.5e-107 NULL
ProfileScan PS50994 INTEGRASE 82 254 22.995 IPR001584

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