Eca_sc000051.1_g0660.1
Sequence
Init: Term:
reverse complement
BLAST
nr CAN65719.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1728 3 1718 0.0 103.64 52.95 69.21
Subject 1791 5 1779
Annot hypothetical protein VITISV_020846 [Vitis vinifera]
araport ATMG00750.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1728 1383 1438 1e-16 6.88 1.85 2.43
Subject 119 35 90
Annot | GAG/POL/ENV polyprotein | ChrM:220830-221189 FORWARD LENGTH=119 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
Coil coil coiled-coil 384 408 NA NULL
Coil coil coiled-coil 1605 1626 NA NULL
Gene3D G3DSA:3.10.10.10 no description 906 1013 1.4e-20 NULL
Gene3D G3DSA:3.30.420.10 no description 1430 1587 2.7e-59 NULL
superfamily SSF56672 DNA/RNA polymerases 875 1259 8.2e-106 NULL
superfamily SSF53098 Ribonuclease H-like 1422 1589 9.3e-50 IPR012337
superfamily SSF50630 Acid proteases 583 701 5.2e-08 IPR021109
HMMPfam PF00665 rve 1429 1540 1.1e-24 IPR001584
HMMPfam PF03732 Retrotrans_gag 89 182 3.7e-17 IPR005162
HMMPfam PF13975 gag-asp_proteas 587 654 3.7e-12 NULL
HMMPanther PTHR10178:SF132 SUBFAMILY NOT NAMED 1089 1711 5e-227 NULL
HMMPanther PTHR10178 GAG/POL/ENV POLYPROTEIN 1089 1711 5e-227 NULL
ProfileScan PS50994 INTEGRASE 1419 1583 24.824 IPR001584

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