Eca_sc000054.1_g0190.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_008245529.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1178 9 1153 0.0 146.43 33.27 52.88
Subject 1725 2 1208
Annot PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103343662 [Prunus mume]
araport AT4G29090.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1178 799 1171 1e-37 48.81 9.84 16.38
Subject 575 2 410
Annot | Ribonuclease H-like superfamily protein | Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPanther PTHR19446:SF34 NON-LTR RETROELEMENT REVERSE TRANSCRIPTASE RELATED 33 1145 3e-200 NULL
HMMPanther PTHR19446 REVERSE TRANSCRIPTASES 33 1145 3e-200 NULL
Coil coil coiled-coil 296 317 NA NULL
superfamily SSF56219 DNase I-like 3 240 1.6e-30 IPR005135
superfamily SSF56672 DNA/RNA polymerases 436 722 1.1e-18 NULL
ProfileScan PS50878 RT_POL 474 755 18.121 IPR000477
HMMPfam PF00078 RVT_1 493 744 2e-42 IPR000477
HMMPfam PF03372 Exo_endo_phos 12 232 8.8e-17 IPR005135
HMMPfam PF13966 zf-RVT 1002 1090 6.3e-14 IPR026960
Gene3D G3DSA:3.60.10.10 no description 11 238 1.4e-18 IPR005135

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