Eca_sc000058.1_g0780.1
Sequence
Init: Term:
reverse complement
BLAST
nr CCH50966.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1449 24 1443 0.0 115.25 41.40 60.11
Subject 1670 266 1648
Annot T4.5 [Malus x robusta]
araport AT4G23160.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1449 932 1430 e-129 71.98 14.63 21.32
Subject 1043 78 579
Annot | cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
superfamily SSF53098 Ribonuclease H-like 527 705 4.6e-47 IPR012337
superfamily SSF56672 DNA/RNA polymerases 965 1401 6.7e-41 NULL
HMMPfam PF07727 RVT_2 966 1209 1.9e-96 IPR013103
HMMPfam PF00665 rve 531 648 4.7e-27 IPR001584
HMMPfam PF14223 UBN2 118 225 3.5e-23 NULL
HMMPfam PF13976 gag_pre-integrs 447 519 4e-08 IPR025724
Gene3D G3DSA:3.30.420.10 no description 531 689 1.4e-28 NULL
HMMPanther PTHR11439:SF127 PREDICTED PROTEIN (FRAGMENT) 85 1444 0 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 85 1444 0 NULL
ProfileScan PS50158 ZF_CCHC 299 312 9.043 IPR001878
ProfileScan PS50994 INTEGRASE 530 696 23.990 IPR001584

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