Eca_sc000058.1_g1440.1
Sequence
Init: Term:
reverse complement
BLAST
nr KYP71220.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 514 10 474 e-124 134.24 41.63 60.11
Subject 690 4 462
Annot Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]
araport ATMG00300.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 514 385 474 3e-16 28.21 6.80 10.50
Subject 145 27 113
Annot | Gag-Pol-related retrotransposon family protein | ChrM:89617-90054 REVERSE LENGTH=145 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPfam PF14227 UBN2_2 83 193 7.9e-35 NULL
HMMPfam PF13976 gag_pre-integrs 404 473 1.2e-12 IPR025724
HMMPfam PF00098 zf-CCHC 238 255 8.5e-05 IPR001878
Gene3D G3DSA:4.10.60.10 no description 230 256 5.6e-05 IPR001878
HMMSmart SM00343 zinc finger 239 255 0.0025 IPR001878
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 54 472 3.8e-70 NULL
ProfileScan PS50158 ZF_CCHC 240 255 9.653 IPR001878

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