Eca_sc000058.1_g1780.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010651288.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 548 1 382 0.0 74.27 50 59.48
Subject 407 23 403
Annot PREDICTED: pentatricopeptide repeat-containing protein At5g66520 isoform X2 [Vitis vinifera]
araport AT2G29760.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 548 9 383 e-131 134.67 34.85 47.44
Subject 738 364 735
Annot | Tetratricopeptide repeat (TPR)-like superfamily protein | Chr2:12712884-12715100 FORWARD LENGTH=738 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMSmart SM00450 Rhodanese Homology Domain 419 548 2.3e-11 IPR001763
HMMPanther PTHR24015:SF61 PGR3 (PROTON GRADIENT REGULATION 3) 1 386 2.1e-181 NULL
HMMPanther PTHR24015 FAMILY NOT NAMED 1 386 2.1e-181 NULL
superfamily SSF52821 Rhodanese/Cell cycle control phosphatase 413 542 5.2e-17 IPR001763
Gene3D G3DSA:3.40.250.10 no description 417 542 2.8e-20 IPR001763
HMMPfam PF01535 PPR 50 68 0.66 IPR002885
HMMPfam PF01535 PPR 151 175 0.087 IPR002885
HMMPfam PF14432 DYW_deaminase 259 370 5.2e-16 NULL
HMMPfam PF13041 PPR_2 80 124 2.7e-08 IPR002885
HMMPfam PF00581 Rhodanese 421 543 1.3e-11 IPR001763
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 81 112 0.00036 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 114 147 0.00013 IPR002885
ProfileScan PS50206 RHODANESE_3 429 545 12.636 IPR001763
ProfileScan PS51257 PROKAR_LIPOPROTEIN 1 20 5.000 NULL
ProfileScan PS51375 PPR 77 111 9.536 IPR002885
ProfileScan PS51375 PPR 44 74 5.766 IPR002885
ProfileScan PS51375 PPR 9 43 5.130 IPR002885
ProfileScan PS51375 PPR 112 147 9.394 IPR002885
ProfileScan PS51375 PPR 148 178 6.204 IPR002885
ProfileScan PS51375 PPR 180 214 6.051 IPR002885

Top