Eca_sc000058.1_g2140.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010653739.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1498 1 1464 0.0 104.00 72.56 82.91
Subject 1558 1 1525
Annot PREDICTED: DNA helicase INO80 isoform X1 [Vitis vinifera]
araport AT3G57300.4 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1498 13 1461 0.0 100.60 64.21 76.63
Subject 1507 13 1492
Annot | DNA helicase INO80-like protein | Chr3:21199612-21207635 FORWARD LENGTH=1507 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
Coil coil coiled-coil 404 444 NA NULL
HMMSmart SM00487 DEAD-like helicases superfamily 564 762 1.2e-37 IPR014001
HMMSmart SM00490 helicase superfamily c-terminal domain 1182 1265 8.2e-23 IPR001650
HMMPanther PTHR10799:SF213 DNA HELICASE INO80-RELATED 4 1365 0 NULL
HMMPanther PTHR10799 SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED 4 1365 0 NULL
superfamily SSF52540 P-loop containing nucleoside triphosphate hydrolases 557 796 2e-84 IPR027417
superfamily SSF52540 P-loop containing nucleoside triphosphate hydrolases 798 1319 1.4e-67 IPR027417
Gene3D G3DSA:3.40.50.300 no description 562 748 1.6e-26 NULL
Gene3D G3DSA:3.40.50.300 no description 1148 1301 1.5e-22 NULL
HMMPfam PF00176 SNF2_N 571 870 1.2e-70 IPR000330
HMMPfam PF13892 DBINO 338 460 1.1e-34 IPR020838
HMMPfam PF00271 Helicase_C 1187 1265 8.6e-14 IPR001650
ProfileScan PS51192 HELICASE_ATP_BIND_1 580 751 22.644 IPR014001
ProfileScan PS51194 HELICASE_CTER 1156 1306 18.043 IPR001650
ProfileScan PS51413 DBINO 332 457 17.420 IPR020838

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