Eca_sc000058.1_g2250.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_002265279.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 293 1 293 0.0 100 81.91 91.80
Subject 293 1 293
Annot PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Vitis vinifera] XP_010645678.1 PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Vitis vinifera] XP_010645679.1 PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Vitis vinifera] XP_010645680.1 PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Vitis vinifera] CAN61017.1 hypothetical protein VITISV_041221 [Vitis vinifera] CBI17728.3 unnamed protein product, partial [Vitis vinifera]
araport AT1G63780.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 293 1 293 e-158 100.34 69.28 86.00
Subject 294 1 294
Annot | Ribosomal RNA processing Brix domain protein | Chr1:23665045-23667243 REVERSE LENGTH=294 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMSmart SM00879 no description 86 262 7.3e-67 IPR007109
HMMPanther PTHR22734 U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 1 291 3.7e-150 NULL
superfamily SSF52954 Class II aaRS ABD-related 82 265 2.7e-63 IPR004154
Gene3D G3DSA:3.40.50.10480 no description 84 263 2.1e-57 IPR007109
HMMPfam PF04427 Brix 88 262 1.1e-49 IPR007109
ProfileScan PS50833 BRIX 83 268 45.427 IPR007109

Top