Eca_sc000058.1_g3090.1
Sequence
Init: Term:
reverse complement
BLAST
nr CCH50966.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1433 6 1429 0.0 116.53 46.12 63.64
Subject 1670 262 1648
Annot T4.5 [Malus x robusta]
araport AT4G23160.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1433 887 1415 e-132 72.78 15.70 22.88
Subject 1043 30 578
Annot | cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPfam PF07727 RVT_2 953 1195 1.3e-104 IPR013103
HMMPfam PF00665 rve 535 650 9.4e-26 IPR001584
HMMPfam PF14223 UBN2 99 210 1.1e-16 NULL
HMMPfam PF13976 gag_pre-integrs 456 521 7.6e-11 IPR025724
ProfileScan PS50994 INTEGRASE 533 699 21.663 IPR001584
HMMPanther PTHR11439:SF127 PREDICTED PROTEIN (FRAGMENT) 22 1427 0 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 22 1427 0 NULL
Gene3D G3DSA:3.30.420.10 no description 533 691 3.4e-28 NULL
superfamily SSF56672 DNA/RNA polymerases 951 1387 1e-44 NULL
superfamily SSF53098 Ribonuclease H-like 530 700 3.6e-42 IPR012337

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