Eca_sc000058.1_g3600.1
Sequence
Init: Term:
reverse complement
BLAST
nr CCH50966.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 693 6 692 e-159 240.98 39.82 60.89
Subject 1670 262 949
Annot T4.5 [Malus x robusta]
araport AT5G48050.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 693 18 280 2e-20 53.24 10.82 17.74
Subject 369 24 257
Annot | Copia-like polyprotein/retrotransposon | Chr5:19472661-19473770 REVERSE LENGTH=369 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPfam PF00665 rve 526 643 1.6e-28 IPR001584
HMMPfam PF14223 UBN2 102 211 2.7e-17 NULL
HMMPfam PF13976 gag_pre-integrs 449 514 4.2e-12 IPR025724
ProfileScan PS50994 INTEGRASE 526 692 21.486 IPR001584
HMMPanther PTHR11439:SF127 PREDICTED PROTEIN (FRAGMENT) 74 690 8.8e-143 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 74 690 8.8e-143 NULL
Gene3D G3DSA:3.30.420.10 no description 525 684 7.3e-32 NULL
superfamily SSF53098 Ribonuclease H-like 523 692 7.5e-45 IPR012337

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