Eca_sc000058.1_g3690.1
Sequence
Init: Term:
reverse complement
BLAST
nr KFK32108.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 396 45 396 0.0 357.32 72.22 77.02
Subject 1415 124 556
Annot hypothetical protein AALP_AA6G199700 [Arabis alpina]
araport ATMG00300.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 396 61 171 1e-14 36.61 9.84 14.89
Subject 145 27 137
Annot | Gag-Pol-related retrotransposon family protein | ChrM:89617-90054 REVERSE LENGTH=145 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPanther PTHR11439:SF127 PREDICTED PROTEIN (FRAGMENT) 45 307 2.1e-70 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 45 307 2.1e-70 NULL
superfamily SSF53098 Ribonuclease H-like 154 291 2.2e-21 IPR012337
ProfileScan PS50994 INTEGRASE 155 253 11.088 IPR001584
HMMPfam PF00665 rve 160 252 3.2e-16 IPR001584
HMMPfam PF13976 gag_pre-integrs 91 145 1e-14 IPR025724
Gene3D G3DSA:3.30.420.10 no description 158 252 4.4e-12 NULL

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