Eca_sc000066.1_g1140.1
Sequence
Init: Term:
reverse complement
BLAST
nr JAT57914.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 265 2 256 e-114 199.62 60.37 75.84
Subject 529 273 528
Annot Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Anthurium amnicola]
araport ATMG00300.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 265 101 217 1e-30 54.71 21.13 28.30
Subject 145 27 141
Annot | Gag-Pol-related retrotransposon family protein | ChrM:89617-90054 REVERSE LENGTH=145 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPfam PF13976 gag_pre-integrs 120 188 2e-16 IPR025724
HMMPfam PF00665 rve 202 264 2.4e-10 IPR001584
Gene3D G3DSA:3.30.420.10 no description 204 252 1.9e-05 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 12 264 2.3e-83 NULL
superfamily SSF53098 Ribonuclease H-like 196 265 9.3e-09 IPR012337

Top