Eca_sc000066.1_g1950.1
Sequence
Init: Term:
reverse complement
BLAST
nr CAN60374.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 714 21 696 e-134 214.98 39.77 54.06
Subject 1535 40 775
Annot hypothetical protein VITISV_001215 [Vitis vinifera]
araport AT1G21280.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 714 21 172 9e-22 33.19 7.56 11.48
Subject 237 16 170
Annot | Copia-like polyprotein/retrotransposon | Chr1:7447690-7448403 REVERSE LENGTH=237 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPfam PF14244 UBN2_3 30 172 1.1e-41 NULL
HMMPfam PF00665 rve 501 633 4.3e-30 IPR001584
HMMPfam PF13976 gag_pre-integrs 419 489 8e-10 IPR025724
Gene3D G3DSA:3.30.420.10 no description 499 665 2.8e-30 NULL
ProfileScan PS50994 INTEGRASE 500 691 17.042 IPR001584
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 193 668 1e-94 NULL
superfamily SSF53098 Ribonuclease H-like 497 671 2.8e-40 IPR012337

Top