Eca_sc000066.1_g2040.1
Sequence
Init: Term:
reverse complement
BLAST
nr AIC77183.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1353 1 1353 0.0 101.18 53.95 70.87
Subject 1369 1 1369
Annot polyprotein [Gossypium barbadense]
araport AT4G23160.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1353 786 1304 e-113 77.08 14.70 22.09
Subject 1043 18 553
Annot | cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
ProfileScan PS50158 ZF_CCHC 250 265 9.389 IPR001878
ProfileScan PS50994 INTEGRASE 512 688 25.675 IPR001584
superfamily SSF53098 Ribonuclease H-like 518 694 1.5e-46 IPR012337
superfamily SSF56672 DNA/RNA polymerases 865 1302 2e-34 NULL
HMMPfam PF07727 RVT_2 866 1111 1.8e-101 IPR013103
HMMPfam PF14223 UBN2 91 206 2.8e-36 NULL
HMMPfam PF00665 rve 523 641 2e-33 IPR001584
HMMPfam PF13976 gag_pre-integrs 457 510 1e-11 IPR025724
HMMPfam PF13961 DUF4219 14 38 7.4e-07 IPR025314
HMMPfam PF00098 zf-CCHC 250 265 9.6e-05 IPR001878
Gene3D G3DSA:4.10.60.10 no description 245 266 0.00089 IPR001878
Gene3D G3DSA:3.30.420.10 no description 522 675 4e-35 NULL
HMMPanther PTHR11439:SF127 PREDICTED PROTEIN (FRAGMENT) 16 1350 0 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 16 1350 0 NULL
HMMSmart SM00343 zinc finger 250 266 0.0035 IPR001878

Top