| nr | pir||T02087 | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
|---|---|---|---|---|---|---|---|---|---|
| Query | 1469 | 20 | 1468 | 0.0 | 97.95 | 40.50 | 58.20 | ||
| Subject | 1439 | 5 | 1438 | ||||||
| Annot | gag/pol polyprotein - maize retrotransposon Hopscotch AAA57005.1 copia-like retrotransposon Hopscotch polyprotein [Zea mays] | ||||||||
| araport | AT4G23160.3 | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
| Query | 1469 | 954 | 1446 | e-117 | 71.00 | 13.27 | 20.08 | ||
| Subject | 1043 | 84 | 579 | ||||||
| Annot | | cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606 | ||||||||
| Analysis | Signature | Location | E-value | InterPro | ||
|---|---|---|---|---|---|---|
| Accession | Description | Start | Stop | |||
| ProfileScan | PS50158 | ZF_CCHC | 297 | 310 | 8.944 | IPR001878 |
| ProfileScan | PS50994 | INTEGRASE | 527 | 693 | 23.637 | IPR001584 |
| superfamily | SSF53098 | Ribonuclease H-like | 523 | 702 | 1.5e-47 | IPR012337 |
| superfamily | SSF56672 | DNA/RNA polymerases | 981 | 1417 | 1.7e-36 | NULL |
| HMMPfam | PF07727 | RVT_2 | 982 | 1225 | 1e-95 | IPR013103 |
| HMMPfam | PF00665 | rve | 531 | 644 | 2.1e-27 | IPR001584 |
| HMMPfam | PF14223 | UBN2 | 123 | 230 | 5.9e-22 | NULL |
| HMMPfam | PF13976 | gag_pre-integrs | 443 | 516 | 1.4e-11 | IPR025724 |
| Gene3D | G3DSA:3.30.420.10 | no description | 528 | 686 | 4.6e-28 | NULL |
| HMMPanther | PTHR11439:SF127 | PREDICTED PROTEIN (FRAGMENT) | 89 | 1461 | 0 | NULL |
| HMMPanther | PTHR11439 | GAG-POL-RELATED RETROTRANSPOSON | 89 | 1461 | 0 | NULL |