Eca_sc000071.1_g0990.1
Sequence
Init: Term:
reverse complement
BLAST
nr BAG72096.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1061 1 1061 0.0 124.50 64.37 76.43
Subject 1321 39 1135
Annot Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
araport AT4G23160.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1061 699 1061 7e-71 98.30 13.47 20.16
Subject 1043 37 413
Annot | cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
ProfileScan PS50158 ZF_CCHC 169 183 8.862 IPR001878
ProfileScan PS50994 INTEGRASE 408 582 22.257 IPR001584
Gene3D G3DSA:3.30.420.10 no description 408 575 8.3e-30 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 1 1061 0 NULL
superfamily SSF53098 Ribonuclease H-like 405 588 2.5e-43 IPR012337
superfamily SSF56672 DNA/RNA polymerases 754 966 7.1e-23 NULL
HMMPfam PF07727 RVT_2 755 1000 5.6e-99 IPR013103
HMMPfam PF00665 rve 410 536 9.7e-27 IPR001584
HMMPfam PF14223 UBN2 21 130 4e-19 NULL
HMMPfam PF13976 gag_pre-integrs 322 398 4.6e-15 IPR025724

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