Eca_sc000072.1_g0680.1
Sequence
Init: Term:
reverse complement
BLAST
nr AAC26250.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 300 81 300 e-107 321.33 51.33 61
Subject 964 65 284
Annot contains similarity to reverse transcriptase (Pfam: rvt.hmm, score 19.29) [Arabidopsis thaliana] CAB80804.1 putative retrotransposon protein [Arabidopsis thaliana]
araport # Length Start End E-value Length(%) Iden(%) Posi(%)
Query # # # # # # #
Subject # # #
Annot
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 95 300 1.7e-87 NULL
superfamily SSF53098 Ribonuclease H-like 147 300 9.9e-37 IPR012337
ProfileScan PS50994 INTEGRASE 151 300 19.577 IPR001584
Gene3D G3DSA:3.30.420.10 no description 152 300 7.1e-26 NULL
HMMPfam PF00665 rve 152 270 5.3e-27 IPR001584
HMMPfam PF13976 gag_pre-integrs 93 140 1.1e-14 IPR025724

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