Eca_sc000076.1_g0400.1
Sequence
Init: Term:
reverse complement
BLAST
nr AAC26250.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 331 1 331 e-125 291.23 60.12 73.41
Subject 964 151 456
Annot contains similarity to reverse transcriptase (Pfam: rvt.hmm, score 19.29) [Arabidopsis thaliana] CAB80804.1 putative retrotransposon protein [Arabidopsis thaliana]
araport ATMG00710.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 331 98 179 3e-12 36.25 9.66 14.50
Subject 120 2 83
Annot | Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein | ChrM:207553-207915 REVERSE LENGTH=120 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPanther PTHR11439:SF127 PREDICTED PROTEIN (FRAGMENT) 11 331 2.5e-92 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 11 331 2.5e-92 NULL
superfamily SSF53098 Ribonuclease H-like 4 156 7.1e-39 IPR012337
ProfileScan PS50994 INTEGRASE 1 150 19.497 IPR001584
Gene3D G3DSA:3.30.420.10 no description 7 143 5.1e-27 NULL
HMMPfam PF00665 rve 4 104 1.8e-25 IPR001584

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