Eca_sc000076.1_g0930.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_015870114.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 344 1 344 0.0 100.29 88.08 93.31
Subject 345 1 345
Annot PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Ziziphus jujuba]
araport AT2G43770.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 344 1 344 0.0 99.70 83.13 91.86
Subject 343 1 343
Annot | Transducin/WD40 repeat-like superfamily protein | Chr2:18134272-18135303 REVERSE LENGTH=343 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
superfamily SSF50978 WD40 repeat-like 50 343 1.1e-81 IPR017986
FPrintScan PR00320 GPROTEINBRPT 112 126 3.1e-08 IPR020472
FPrintScan PR00320 GPROTEINBRPT 155 169 3.1e-08 IPR020472
FPrintScan PR00320 GPROTEINBRPT 238 252 3.1e-08 IPR020472
HMMSmart SM00320 WD40 repeats 43 82 5.4e-08 IPR001680
HMMSmart SM00320 WD40 repeats 86 125 5.1e-08 IPR001680
HMMSmart SM00320 WD40 repeats 128 168 5.6e-08 IPR001680
HMMSmart SM00320 WD40 repeats 171 209 0.0025 IPR001680
HMMSmart SM00320 WD40 repeats 212 251 2.9e-09 IPR001680
HMMSmart SM00320 WD40 repeats 258 301 1.3e-06 IPR001680
HMMSmart SM00320 WD40 repeats 304 343 0.005 IPR001680
Gene3D G3DSA:2.130.10.10 no description 44 341 2.9e-83 IPR015943
ProfileScan PS50082 WD_REPEATS_2 50 83 15.187 IPR001680
ProfileScan PS50082 WD_REPEATS_2 93 134 16.791 IPR001680
ProfileScan PS50082 WD_REPEATS_2 135 177 10.508 IPR001680
ProfileScan PS50082 WD_REPEATS_2 184 218 11.745 IPR001680
ProfileScan PS50082 WD_REPEATS_2 219 253 16.657 IPR001680
ProfileScan PS50082 WD_REPEATS_2 280 310 10.976 IPR001680
ProfileScan PS50082 WD_REPEATS_2 311 344 8.503 IPR001680
ProfileScan PS50294 WD_REPEATS_REGION 50 344 59.004 IPR017986
HMMPanther PTHR22847:SF104 OS06G0131100 PROTEIN 16 344 3.6e-258 NULL
HMMPanther PTHR22847 WD40 REPEAT PROTEIN 16 344 3.6e-258 NULL
HMMPfam PF00400 WD40 48 82 7.7e-09 IPR001680
HMMPfam PF00400 WD40 91 125 3.6e-07 IPR001680
HMMPfam PF00400 WD40 130 168 6.3e-08 IPR001680
HMMPfam PF00400 WD40 182 209 0.0018 IPR001680
HMMPfam PF00400 WD40 214 251 2.8e-09 IPR001680
HMMPfam PF00400 WD40 277 301 0.0015 IPR001680
HMMPfam PF00400 WD40 307 340 1.5e-05 IPR001680
PatternScan PS00678 WD_REPEATS_1 69 83 NA IPR019775
PatternScan PS00678 WD_REPEATS_1 112 126 NA IPR019775
PatternScan PS00678 WD_REPEATS_1 155 169 NA IPR019775
PatternScan PS00678 WD_REPEATS_1 196 210 NA IPR019775
PatternScan PS00678 WD_REPEATS_1 288 302 NA IPR019775

Top